Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4827 and Pf6N2E2_4828 overlap by 4 nucleotidesPf6N2E2_4828 and Pf6N2E2_4829 are separated by 238 nucleotidesPf6N2E2_4829 and Pf6N2E2_4830 are separated by 113 nucleotidesPf6N2E2_4830 and Pf6N2E2_4831 are separated by 75 nucleotides Pf6N2E2_4827 - Lipoate-protein ligase A, at 5,581,701 to 5,582,402 _4827 Pf6N2E2_4828 - Vfr transcriptional regulator / Cyclic AMP receptor protein, at 5,582,399 to 5,583,043 _4828 Pf6N2E2_4829 - OsmC/Ohr family protein, at 5,583,282 to 5,583,704 _4829 Pf6N2E2_4830 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-), at 5,583,818 to 5,584,465 _4830 Pf6N2E2_4831 - Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17), at 5,584,541 to 5,584,894 _4831
Group Condition Pf6N2E2_4827 Pf6N2E2_4828 Pf6N2E2_4829 Pf6N2E2_4830 Pf6N2E2_4831
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.1 -0.3 -1.2 N.D. -0.4
stress Cobalt chloride 0.6 mM +0.9 -0.6 -2.0 N.D. -0.2
carbon source L-Leucine (C) -0.8 -0.4 -0.3 N.D. -0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.0 -0.4 -1.1 N.D. -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.2 -1.3 N.D. -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.3 +0.0 -0.8 N.D. -0.3
nitrogen source Gly-Glu (N) +0.0 -0.2 -1.1 N.D. -0.2
stress deoxycholate 0.0125 M -1.6 +0.6 -0.3 N.D. -0.1
carbon source Trisodium citrate (C) -1.8 -0.1 +0.6 N.D. +0.0
carbon source Ying_Others16 rep B; time point 2 +0.0 -0.5 -0.9 N.D. +0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.2 -0.3 -0.8 N.D. -0.2
stress RCH2 defined with Cobalt chloride 0.04 mM +0.4 -0.1 -1.7 N.D. +0.4
stress Cobalt chloride 0.6 mM +0.9 -0.3 -1.4 N.D. -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 -0.1 -1.1 N.D. +0.4
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -0.3 -0.9 N.D. +0.2
carbon source Ying_Nucleobase14 rep C; time point 2 +0.3 -0.5 -0.3 N.D. -0.2
carbon source Trisodium citrate (C) -1.2 -0.0 +0.5 N.D. -0.0
carbon source Ying_Others16 rep C; time point 3 +0.3 -0.5 -0.7 N.D. +0.3
stress Cobalt chloride 0.6 mM +0.2 -0.1 -0.9 N.D. +0.2
stress Nickel (II) chloride 0.0025 M -0.1 -0.1 -0.8 N.D. +0.5
stress Cobalt chloride 0.4 mM +0.2 -0.1 -0.8 N.D. +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.4 -0.1 -0.9 N.D. +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 +0.3 -0.1 -0.8 N.D. +0.3
nitrogen source L-Serine (N) -0.7 -0.5 +1.1 N.D. +0.0
motility inner cut, LB soft agar motility assay -0.7 +0.3 +0.3 N.D. -0.1
carbon source Ying_Others16 rep B; time point 3 +0.4 -0.2 -0.8 N.D. +0.4
stress Bile salts 0.0125 M -0.8 +0.6 -0.2 N.D. +0.3
stress Cobalt chloride 0.6 mM +0.5 -0.3 -0.5 N.D. +0.2
motility outer cut, LB soft agar motility assay -0.0 +0.4 +0.7 N.D. -0.2
carbon source D-Galactose (C) +0.4 +0.3 +0.6 N.D. +0.1
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