Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4800 and Pf6N2E2_4801 are separated by 113 nucleotidesPf6N2E2_4801 and Pf6N2E2_4802 are separated by 300 nucleotidesPf6N2E2_4802 and Pf6N2E2_4803 are separated by 32 nucleotidesPf6N2E2_4803 and Pf6N2E2_4804 overlap by 1 nucleotides Pf6N2E2_4800 - yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data), at 5,549,288 to 5,550,559 _4800 Pf6N2E2_4801 - yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data), at 5,550,673 to 5,552,595 _4801 Pf6N2E2_4802 - Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1), at 5,552,896 to 5,553,225 _4802 Pf6N2E2_4803 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41), at 5,553,258 to 5,554,133 _4803 Pf6N2E2_4804 - ApaG protein, at 5,554,133 to 5,554,513 _4804
Group Condition Pf6N2E2_4800 Pf6N2E2_4801 Pf6N2E2_4802 Pf6N2E2_4803 Pf6N2E2_4804
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -2.6 -2.3 -0.9 -2.7 -0.4
carbon source propionate (C) -2.1 -2.1 -0.1 -3.8 +0.5
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -2.2 -1.9 -0.7 -1.9 -0.7
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -1.9 -1.7 -0.6 -2.7 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 3 -2.3 -2.3 -0.4 -1.0 -1.0
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -1.8 -1.6 -0.5 -2.6 -0.5
carbon source Ying_OrganicAcid7 rep C; time point 3 -2.3 -2.4 -0.4 -0.5 -1.0
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -1.6 -1.3 -0.6 -2.3 -0.8
stress acetate 80 mM +0.0 +0.0 -0.1 -5.7 -0.4
carbon source L-Isoleucine (C) -0.5 -0.5 -0.4 -4.3 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -2.0 -2.4 -0.5 -0.2 -0.4
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -1.4 -1.2 +0.0 -2.1 -0.7
carbon source D-Sorbitol (C) -0.4 -0.4 -0.0 -4.1 -0.4
nitrogen source nitrogen source nitrate 20mM -0.2 -0.1 -0.3 -4.6 -0.2
resistance 20 mM putrescine -1.5 -1.3 -0.2 -1.7 -0.5
stress 5-Hydroxymethylfurfural 10 mM +0.1 -0.0 -0.3 -5.1 +0.1
carbon source L-Isoleucine (C) -0.5 -0.4 -0.4 -3.9 -0.1
nitrogen source nitrogen source nitrite 5mM -0.4 -0.4 +0.3 -4.5 -0.2
nitrogen source nitrogen source nitrite 0.5mM -0.2 -0.4 +0.1 -4.7 +0.0
carbon source L-Alanine (C) -0.2 -0.3 -0.3 -4.2 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.1 +0.1 -4.8 -0.2
nitrogen source Uridine (N) -0.4 -0.3 -0.2 -3.9 -0.3
carbon source propionate (C) -2.5 -1.6 -0.4 -0.7 +0.2
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.0 -0.1 -4.7 -0.1
carbon source Carnitine Hydrochloride (C) -0.1 +0.0 -0.4 -4.3 -0.2
nitrogen source nitrogen source nitrite 1mM -0.2 -0.3 -0.1 -4.8 +0.6
nitrogen source L-Glutamic (N) -0.3 -0.1 -0.5 -4.0 +0.1
motility inner cut, LB soft agar motility assay -0.2 -0.2 -0.2 -3.6 +0.8
stress Cobalt chloride 0.6 mM -0.0 +0.2 +1.0 +3.5 +0.6
stress Cobalt chloride 0.6 mM +0.1 +0.2 +0.8 +4.1 +0.5
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