Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4744 and Pf6N2E2_4745 are separated by 66 nucleotidesPf6N2E2_4745 and Pf6N2E2_4746 are separated by 4 nucleotidesPf6N2E2_4746 and Pf6N2E2_4747 are separated by 177 nucleotidesPf6N2E2_4747 and Pf6N2E2_4748 overlap by 4 nucleotides Pf6N2E2_4744 - putative iron-regulated membrane protein, at 5,479,640 to 5,480,770 _4744 Pf6N2E2_4745 - hypothetical protein, at 5,480,837 to 5,480,995 _4745 Pf6N2E2_4746 - Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent, at 5,481,000 to 5,483,426 _4746 Pf6N2E2_4747 - Transmembrane sensor, at 5,483,604 to 5,484,578 _4747 Pf6N2E2_4748 - RNA polymerase sigma-70 factor, ECF subfamily, at 5,484,575 to 5,485,024 _4748
Group Condition Pf6N2E2_4744 Pf6N2E2_4745 Pf6N2E2_4746 Pf6N2E2_4747 Pf6N2E2_4748
motility outer cut, LB soft agar motility assay -0.2 N.D. -0.0 -3.4 -0.1
stress Nickel (II) chloride 0.0025 M +0.0 N.D. -0.1 -1.3 -0.5
carbon source D-Gluconic Acid (C) -0.2 N.D. -0.0 -1.4 -0.0
lb LB no stress 48 hours -0.6 N.D. -0.0 -0.7 -0.4
nitrogen source L-Isoleucine (N) -0.4 N.D. -0.0 -1.2 +0.1
carbon source D-Galactose (C) -0.1 N.D. +0.1 -0.8 -0.6
carbon source Tween 20 (C) -0.0 N.D. -0.0 -1.2 -0.2
carbon source D-Trehalose (C) +0.3 N.D. -0.0 -1.3 -0.3
stress acetate 80 mM -0.1 N.D. -0.0 -0.8 -0.4
nitrogen source L-Serine (N) -0.7 N.D. -0.1 +0.1 -0.5
carbon source m-Inositol (C) -0.1 N.D. -0.1 -0.6 -0.4
carbon source Carbon source D,L-Lactate 10 mM -0.5 N.D. -0.1 -0.5 -0.1
lb LB no stress 48 hours -0.1 N.D. +0.1 -0.7 -0.3
carbon source D-Xylose (C) +0.3 N.D. -0.1 -1.2 -0.1
nitrogen source nitrogen source nitrate 5mM -1.1 N.D. +0.1 -0.1 +0.1
carbon source a-Ketoglutaric (C) -0.2 N.D. -0.1 -0.8 +0.2
stress phosphite 0.25 M -0.6 N.D. -0.1 +0.1 -0.3
stress RCH2 defined with Cobalt chloride 0.02 mM -0.6 N.D. -0.1 +0.3 -0.3
carbon source D,L-Lactate (C) +0.2 N.D. -0.1 -0.8 +0.1
carbon source casaminos (C) +0.4 N.D. -0.1 -0.6 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 +0.3 N.D. +0.1 -0.7 +0.2
stress Cadmium chloride hemipentahydrate 0.00005 M -0.7 N.D. +0.1 +0.3 +0.2
stress Cobalt chloride 0.6 mM -0.3 N.D. -0.1 +0.7 -0.4
nitrogen source nitrogen source nitrite 5mM -0.3 N.D. -0.1 +0.7 -0.3
nitrogen source L-Glutamine (N) -0.5 N.D. -0.0 +0.4 +0.3
stress Hydrochloric Acid 0.005 M -0.3 N.D. -0.0 +0.7 +0.2
nitrogen source Cytosine (N) -0.2 N.D. -0.1 +1.0 -0.2
lb LB no stress 24 hours +0.4 N.D. -0.2 +0.7 -0.0
stress Zinc chloride 0.0000015625 M +0.2 N.D. +0.0 +0.9 +0.4
stress Hydroxylamine 0.5 M +0.4 N.D. -0.2 +1.4 -0.0
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