Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_4588 and Pf6N2E2_4589 are separated by 79 nucleotidesPf6N2E2_4589 and Pf6N2E2_4590 are separated by 54 nucleotidesPf6N2E2_4590 and Pf6N2E2_4591 are separated by 9 nucleotidesPf6N2E2_4591 and Pf6N2E2_4592 are separated by 144 nucleotides Pf6N2E2_4588 - COG2363, at 5,318,365 to 5,318,745 _4588 Pf6N2E2_4589 - Sulfur carrier protein ThiS, at 5,318,825 to 5,319,043 _4589 Pf6N2E2_4590 - Thiazole biosynthesis protein ThiG, at 5,319,098 to 5,319,892 _4590 Pf6N2E2_4591 - tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33), at 5,319,902 to 5,320,627 _4591 Pf6N2E2_4592 - Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific, at 5,320,772 to 5,321,095 _4592
Group Condition Pf6N2E2_4588 Pf6N2E2_4589 Pf6N2E2_4590 Pf6N2E2_4591 Pf6N2E2_4592
vitamin No vitamins t2 +0.2 N.D. -3.8 +0.3 -0.2
stress Hydroxylamine 0.5 M -0.8 N.D. -1.3 -0.9 -0.3
carbon source Ying_Nucleobase14 rep C; time point 3 +0.2 N.D. -2.5 -0.1 -0.5
carbon source Ying_Nucleobase14 rep C; time point 2 -0.0 N.D. -2.7 +0.1 +0.0
carbon source Ying_Nucleobase14 rep B; time point 3 +0.2 N.D. -2.5 -0.0 -0.3
carbon source Ying_Nucleobase14 rep A; time point 3 +0.0 N.D. -2.4 -0.2 +0.1
stress deoxycholate 0.0125 M -0.2 N.D. -1.6 -0.3 -0.4
stress antimonate 0.005 M -0.3 N.D. -0.6 -1.2 -0.2
nitrogen source nitrogen source nitrate 20mM -0.4 N.D. -0.2 -1.1 -0.6
stress pyrophosphate 0.0025 M -0.6 N.D. -0.4 -1.2 -0.1
stress Cobalt chloride 0.4 mM +0.1 N.D. -0.5 -1.5 -0.3
stress Gjerstad humics 0.5 M -0.7 N.D. -0.4 -1.1 +0.1
stress Rifampicin 0.003 mg/ml -0.1 N.D. -0.5 -1.4 -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 +0.1 N.D. -2.4 +0.0 +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 +0.3 N.D. -2.5 +0.2 -0.2
nitrogen source nitrogen source nitrate 20mM -0.3 N.D. -0.5 -0.8 -0.4
carbon source Ying_Nucleobase14 rep B; time point 1 +0.3 N.D. -1.8 -0.2 -0.2
stress Bile salts 0.0125 M -0.5 N.D. -0.7 +0.0 -0.8
lb LB no stress 48 hours -0.1 N.D. -0.5 -1.0 -0.3
stress DEANONOate 0.000625 M -0.0 N.D. -0.9 -1.2 +0.4
carbon source Ying_Nucleobase14 rep C; time point 1 +0.2 N.D. -2.0 +0.1 +0.1
denitrifying Nitrate reduction, replicate C +0.0 N.D. -1.8 +0.3 +0.0
vitamin No vitamins t1 +0.1 N.D. -1.5 +0.3 -0.1
stress Nickel (II) chloride 1.5 mM -0.0 N.D. +0.5 +1.3 -0.2
stress RCH2 defined with Cobalt chloride 0.04 mM +0.1 N.D. +0.1 +1.5 -0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 N.D. +0.7 +1.2 -0.0
stress Nickel (II) chloride 1.5 mM +0.0 N.D. +0.6 +1.4 -0.2
stress Nickel (II) chloride 1.5 mM -0.2 N.D. +0.9 +1.2 -0.0
stress Nickel (II) chloride 0.0025 M -0.3 N.D. +0.5 +1.7 +0.0
stress Nickel (II) chloride 0.0025 M -0.0 N.D. +0.9 +1.5 +0.1
remove
Pf6N2E2_4588
plot		 remove
Pf6N2E2_4589
plot		 remove
Pf6N2E2_4590		 remove
Pf6N2E2_4591
plot		 remove
Pf6N2E2_4592
plot