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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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500 nt
Pf6N2E2_4580 and Pf6N2E2_4581 overlap by 8 nucleotides
Pf6N2E2_4581 and Pf6N2E2_4582 are separated by 155 nucleotides
Pf6N2E2_4582 and Pf6N2E2_4583 are separated by 57 nucleotides
Pf6N2E2_4583 and Pf6N2E2_4584 overlap by 4 nucleotides
Pf6N2E2_4580 - FIG015287: Zinc protease, at 5,310,113 to 5,311,603
_4580
Pf6N2E2_4581 - FIG015547: peptidase, M16 family, at 5,311,596 to 5,312,951
_4581
Pf6N2E2_4582 - hypothetical protein, at 5,313,107 to 5,313,238
_4582
Pf6N2E2_4583 - Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1), at 5,313,296 to 5,314,729
_4583
Pf6N2E2_4584 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 5,314,726 to 5,315,397
_4584
Group
Condition
Pf6N2E2
_4580
Pf6N2E2
_4581
Pf6N2E2
_4582
Pf6N2E2
_4583
Pf6N2E2
_4584
stress
molybdate 0.25 M
-0.6
-0.8
N.D.
N.D.
-5.5
stress
Choline Lysine 20 mM
-0.8
-0.6
N.D.
N.D.
-4.7
stress
sodium carbonate 0.0125 M
-0.2
-0.3
N.D.
N.D.
-5.6
stress
thiosulfate 0.25 M
-0.7
-0.6
N.D.
N.D.
-4.3
stress
molybdate 0.25 M
-0.6
-0.7
N.D.
N.D.
-4.1
carbon source
D-Galactose (C)
-1.7
-1.7
N.D.
N.D.
-2.0
stress
deoxycholate 0.0125 M
-0.5
+0.5
N.D.
N.D.
-5.1
stress
Chloride 600 mM
-0.1
-0.1
N.D.
N.D.
-4.8
motility
inner cut, LB soft agar motility assay
-0.9
-0.4
N.D.
N.D.
-3.6
carbon source
D-Galactose (C)
-1.5
-1.8
N.D.
N.D.
-1.5
motility
outer cut, LB soft agar motility assay
-0.7
-0.4
N.D.
N.D.
-3.6
stress
dimethyl sulfone 0.25 M
+0.1
+0.3
N.D.
N.D.
-5.2
stress
Bile salts 0.0125 M
+0.3
+0.2
N.D.
N.D.
-5.2
stress
perchlorate 50 mM
-0.5
-0.5
N.D.
N.D.
-3.6
stress
tungstate 0.05 M
-0.9
-0.7
N.D.
N.D.
-2.8
stress
Benzethonium chloride 0.02 mM
+0.3
+0.4
N.D.
N.D.
-4.8
motility
inner cut, LB soft agar motility assay
-0.5
-0.5
N.D.
N.D.
-3.0
stress
Fluorophosphate 0.125 M
+0.2
+0.2
N.D.
N.D.
-4.5
stress
thiosulfate 0.25 M
-0.4
-0.5
N.D.
N.D.
-3.2
stress
Fluorophosphate 0.125 M
+0.1
+0.2
N.D.
N.D.
-4.3
stress
tungstate 0.05 M
-0.8
-0.4
N.D.
N.D.
-2.7
motility
inner cut, LB soft agar motility assay
-0.9
-0.7
N.D.
N.D.
-2.0
stress
L-Lysine 25 mM
-0.3
-0.4
N.D.
N.D.
-2.8
stress
nitrate 0.125 M
-0.1
-0.0
N.D.
N.D.
-3.4
stress
phosphite 0.25 M
-0.1
+0.3
N.D.
N.D.
-3.2
stress
4-Hydroxyacetophenone 0.00025 M
+0.3
+0.8
N.D.
N.D.
-3.8
stress
Hydroxylamine 0.5 M
+0.5
+0.6
N.D.
N.D.
-3.1
stress
4-Hydroxyacetophenone 0.00025 M
+0.6
+0.6
N.D.
N.D.
-3.1
stress
Vancomycin 0.24 mg/ml
+1.3
+1.6
N.D.
N.D.
-2.4
stress
Rifampicin 0.003 mg/ml
+1.7
+2.1
N.D.
N.D.
-2.7
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