Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_456 and Pf6N2E2_457 are separated by 103 nucleotidesPf6N2E2_457 and Pf6N2E2_458 are separated by 299 nucleotidesPf6N2E2_458 and Pf6N2E2_459 are separated by 174 nucleotidesPf6N2E2_459 and Pf6N2E2_460 are separated by 262 nucleotides Pf6N2E2_456 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data), at 519,446 to 520,522 _456 Pf6N2E2_457 - hypothetical protein, at 520,626 to 521,573 _457 Pf6N2E2_458 - Protein rarD, at 521,873 to 522,757 _458 Pf6N2E2_459 - Oxidoreductase, aldo/keto reductase family, at 522,932 to 523,945 _459 Pf6N2E2_460 - Glycerate kinase (EC 2.7.1.31), at 524,208 to 525,344 _460
Group Condition Pf6N2E2_456 Pf6N2E2_457 Pf6N2E2_458 Pf6N2E2_459 Pf6N2E2_460
carbon source L-Phenylalanine (C) -4.4 N.D. -0.4 -0.1 -0.2
carbon source L-Phenylalanine (C) -4.0 N.D. -0.1 -0.1 -0.1
nitrogen source L-Phenylalanine (N) -3.9 N.D. +0.0 -0.2 +0.2
stress Bile salts 0.0125 M -0.1 N.D. -0.3 +0.2 -3.1
nitrogen source L-Phenylalanine (N) -3.7 N.D. +0.1 +0.1 +0.3
nitrogen source nitrogen source nitrite 1mM -0.1 N.D. -0.1 -0.2 -1.6
lb LB no stress 48 hours -0.6 N.D. -0.0 +0.1 -1.2
stress rubidium chloride 0.25 M -0.2 N.D. -0.3 -0.2 -1.0
carbon source Glycerol (C) -0.1 N.D. -0.7 -0.2 -0.6
stress Hydrochloric Acid 0.005 M -0.4 N.D. -0.0 -0.2 -1.1
motility inner cut, LB soft agar motility assay -0.3 N.D. -0.2 -0.3 -0.7
carbon source L-Alanine (C) -0.1 N.D. -0.5 -0.2 -0.7
lb LB no stress 24 hours -0.4 N.D. -0.2 -0.2 -0.8
carbon source Ying_OrganicAcid7 rep A; time point 3 -1.3 N.D. +0.1 -0.2 -0.1
carbon source RCH2_defined +0.3 N.D. -0.4 -0.3 -1.0
stress Chloride 600 mM -0.1 N.D. +0.1 +0.2 -1.5
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.9 N.D. +0.0 -0.3 -0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -1.5 N.D. +0.1 -0.1 +0.1
stress bromate 0.05 M -0.6 N.D. -0.3 -0.3 +0.4
stress Nickel (II) chloride 0.0025 M +0.4 N.D. +0.5 +0.2 -1.8
stress periodate 0.00125 M -0.1 N.D. -0.3 -0.3 +0.8
carbon source Trisodium citrate (C) -0.1 N.D. +0.6 +0.3 -0.6
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.1 N.D. -0.3 +0.1 +1.0
stress Cobalt chloride 0.6 mM +0.2 N.D. +0.7 +0.4 +0.1
stress Cobalt chloride 0.6 mM +0.3 N.D. +0.6 +0.5 +0.1
stress Cobalt chloride 0.4 mM +0.3 N.D. +0.4 +0.4 +0.3
stress Cobalt chloride 0.6 mM +0.0 N.D. +0.7 +0.3 +0.5
stress Cobalt chloride 0.6 mM +0.3 N.D. +0.9 +0.7 -0.2
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 N.D. +3.0 +1.7 -0.5
stress RCH2 defined with Cobalt chloride 0.04 mM -0.4 N.D. +3.4 +1.6 +0.5
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