Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4560 and Pf6N2E2_4561 are separated by 86 nucleotidesPf6N2E2_4561 and Pf6N2E2_4562 are separated by 144 nucleotidesPf6N2E2_4562 and Pf6N2E2_4563 are separated by 242 nucleotidesPf6N2E2_4563 and Pf6N2E2_4564 are separated by 248 nucleotides Pf6N2E2_4560 - probable integral membrane protein NMA1899, at 5,288,951 to 5,290,318 _4560 Pf6N2E2_4561 - Dihydrofolate reductase (EC 1.5.1.3), at 5,290,405 to 5,290,917 _4561 Pf6N2E2_4562 - L-cystine uptake protein TcyP, at 5,291,062 to 5,292,453 _4562 Pf6N2E2_4563 - Phosphoserine phosphatase (EC 3.1.3.3), at 5,292,696 to 5,293,751 _4563 Pf6N2E2_4564 - Dihydroxy-acid dehydratase (EC 4.2.1.9), at 5,294,000 to 5,295,841 _4564
Group Condition Pf6N2E2_4560 Pf6N2E2_4561 Pf6N2E2_4562 Pf6N2E2_4563 Pf6N2E2_4564
carbon source a-Ketoglutaric (C) -0.3 N.D. -1.3 -0.1 -5.2
nitrogen source nitrogen source nitrate 5mM -0.2 N.D. -1.9 -0.1 -4.1
nitrogen source L-Aspartic Acid (N) -0.5 N.D. -0.2 -0.1 -5.4
carbon source D-Glucosamine Hydrochloride (C) -0.3 N.D. -0.6 -0.3 -4.9
nitrogen source nitrogen source nitrate 20mM -0.2 N.D. -1.4 -0.0 -4.3
nitrogen source L-Proline (N) -0.5 N.D. -0.5 +0.0 -4.9
nitrogen source L-Histidine (N) -0.1 N.D. -0.4 +0.1 -5.3
carbon source L-Glutamine (C) -0.0 N.D. -1.0 -0.0 -4.7
carbon source D-Galactose (C) +0.3 N.D. -1.1 -0.2 -4.7
nitrogen source L-Glutamic (N) -0.1 N.D. -0.5 -0.0 -5.0
nitrogen source nitrogen source nitrate 5mM -0.3 N.D. -1.3 +0.0 -4.0
carbon source D-Xylose (C) -0.1 N.D. -0.2 +0.0 -5.3
carbon source Putrescine (C) -0.2 N.D. -0.4 -0.1 -4.8
carbon source D-Sorbitol (C) -0.2 N.D. -0.2 +0.0 -5.1
nitrogen source L-Asparagine (N) -0.3 N.D. -0.5 +0.0 -4.7
nitrogen source nitrogen source nitrite 5mM +0.3 N.D. -1.3 -0.1 -4.3
stress RCH2 defined with copper (II) chloride 0.03 mM +0.0 N.D. +0.2 -0.0 -5.5
nitrogen source Cytosine (N) +0.2 N.D. -0.8 +0.0 -4.7
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +0.5 N.D. -0.5 -0.0 -5.2
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A +0.0 N.D. +0.3 -0.0 -5.4
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B +0.5 N.D. -0.4 +0.0 -5.0
nitrogen source Ammonium chloride (N) -0.5 N.D. +0.4 +0.0 -4.7
nitrogen source Urea (N) -0.1 N.D. +0.5 -0.0 -5.1
carbon source L-Isoleucine (C) +0.5 N.D. +0.2 -0.1 -5.1
carbon source RCH2_defined -0.2 N.D. +0.8 -0.0 -4.8
nitrogen source L-Histidine (N) -0.5 N.D. +0.7 +0.1 -4.4
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.3 N.D. +0.7 +0.1 -4.5
denitrifying Nitrate reduction, replicate C +0.3 N.D. +0.6 +0.0 -4.8
stress RCH2 defined with Cobalt chloride 0.02 mM +0.2 N.D. +0.9 +0.1 -4.8
stress RCH2 defined with Cobalt chloride 0.04 mM -0.3 N.D. +0.9 +0.0 -4.3
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