Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_454 and Pf6N2E2_455 are separated by 120 nucleotidesPf6N2E2_455 and Pf6N2E2_456 are separated by 250 nucleotidesPf6N2E2_456 and Pf6N2E2_457 are separated by 103 nucleotidesPf6N2E2_457 and Pf6N2E2_458 are separated by 299 nucleotides Pf6N2E2_454 - Mobile element protein, at 516,862 to 518,130 _454 Pf6N2E2_455 - Permease of the drug/metabolite transporter (DMT) superfamily, at 518,251 to 519,195 _455 Pf6N2E2_456 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data), at 519,446 to 520,522 _456 Pf6N2E2_457 - hypothetical protein, at 520,626 to 521,573 _457 Pf6N2E2_458 - Protein rarD, at 521,873 to 522,757 _458
Group Condition Pf6N2E2_454 Pf6N2E2_455 Pf6N2E2_456 Pf6N2E2_457 Pf6N2E2_458
carbon source L-Phenylalanine (C) N.D. -0.0 -4.4 N.D. -0.4
carbon source L-Phenylalanine (C) N.D. +0.2 -4.0 N.D. -0.1
nitrogen source L-Phenylalanine (N) N.D. -0.1 -3.7 N.D. +0.1
nitrogen source L-Phenylalanine (N) N.D. +0.3 -3.9 N.D. +0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. -0.3 -1.3 N.D. +0.1
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. -0.1 -1.5 N.D. +0.1
stress Zinc chloride 0.0000015625 M N.D. -0.4 -0.6 N.D. -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. -0.2 -0.9 N.D. -0.1
motility outer cut, LB soft agar motility assay N.D. -0.3 -0.5 N.D. -0.3
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. -0.4 -0.7 N.D. -0.0
carbon source Ying_Others16 rep C; time point 1 N.D. -0.9 -0.2 N.D. +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. -0.2 -0.5 N.D. -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. -0.0 -0.7 N.D. -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. -0.0 -0.9 N.D. +0.0
lb LB no stress 48 hours N.D. -0.2 -0.4 N.D. -0.3
carbon source Glycerol (C) N.D. +0.0 -0.1 N.D. -0.7
lb LB no stress 24 hours N.D. +0.1 -0.5 N.D. -0.4
stress bromate 0.05 M N.D. +0.0 -0.6 N.D. -0.3
nitrogen source L-Serine (N) N.D. +0.2 -0.3 N.D. -0.7
nitrogen source Putrescine (N) N.D. -0.5 +0.2 N.D. -0.2
carbon source RCH2_defined N.D. -0.3 +0.3 N.D. -0.4
vitamin No vitamins t2 N.D. +0.5 -0.2 N.D. -0.2
stress Cobalt chloride 0.6 mM N.D. -0.4 +0.2 N.D. +0.7
vitamin No vitamins t1 N.D. +0.7 -0.2 N.D. +0.1
stress Cobalt chloride 0.6 mM N.D. -0.0 +0.3 N.D. +0.6
stress Nickel (II) chloride 0.0025 M N.D. +0.0 +0.4 N.D. +0.5
stress Magnesium chloride 0.125 M N.D. +0.5 +0.3 N.D. +0.2
stress Cobalt chloride 0.6 mM N.D. +0.1 +0.3 N.D. +0.9
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. -0.7 -0.2 N.D. +3.0
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. +0.0 -0.4 N.D. +3.4
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