Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4530 and Pf6N2E2_4531 are separated by 157 nucleotidesPf6N2E2_4531 and Pf6N2E2_4532 are separated by 2 nucleotidesPf6N2E2_4532 and Pf6N2E2_4533 overlap by 14 nucleotidesPf6N2E2_4533 and Pf6N2E2_4534 are separated by 115 nucleotides Pf6N2E2_4530 - Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), at 5,263,855 to 5,265,942 _4530 Pf6N2E2_4531 - hypothetical protein, at 5,266,100 to 5,266,993 _4531 Pf6N2E2_4532 - Flagellum-specific ATP synthase FliI, at 5,266,996 to 5,268,351 _4532 Pf6N2E2_4533 - RspO, at 5,268,338 to 5,268,757 _4533 Pf6N2E2_4534 - hypothetical protein, at 5,268,873 to 5,269,319 _4534
Group Condition Pf6N2E2_4530 Pf6N2E2_4531 Pf6N2E2_4532 Pf6N2E2_4533 Pf6N2E2_4534
stress bromate 0.05 M -0.7 -2.4 +0.3 N.D. -0.5
nitrogen source L-Serine (N) -0.0 -1.6 -0.1 N.D. -0.7
nitrogen source nitrogen source nitrite 5mM -0.3 -1.3 -0.5 N.D. -0.2
nitrogen source Glucuronamide (N) -0.5 -0.6 -0.2 N.D. -0.9
nitrogen source nitrogen source Ammonium chloride 20mM -0.5 -1.4 -0.1 N.D. +0.1
carbon source Ying_Others16 rep C; time point 1 +0.2 -0.9 +0.3 N.D. -1.6
stress molybdate 0.25 M +0.1 -1.3 -0.1 N.D. -0.6
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.8 +0.2 -0.0 N.D. -1.2
lb LB no stress 48 hours -0.3 -0.9 +0.2 N.D. -0.6
stress Hydroxylamine 0.5 M -0.5 +0.5 +0.0 N.D. -1.5
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.1 -0.9 +0.2 N.D. -0.8
carbon source Ying_AminoAcid20 rep C; time point 2 +0.2 -1.0 +0.2 N.D. -0.8
carbon source Ying_Nucleobase14 rep C; time point 2 +0.3 -0.9 +0.2 N.D. -1.0
nitrogen source Cytidine (N) +0.2 -1.8 -0.0 N.D. +0.4
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 -1.0 +0.4 N.D. -0.9
carbon source Ying_AminoAcid20 rep B; time point 2 +0.3 -1.0 +0.5 N.D. -1.0
lb LB no stress 48 hours -0.4 +0.1 -1.2 N.D. +0.5
stress Zinc chloride 0.0000015625 M -0.0 -1.5 -0.5 N.D. +1.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.4 -0.9 +0.5 N.D. -0.5
nitrogen source Glucuronamide (N) -0.3 +1.2 -0.3 N.D. -1.1
carbon source Ying_Nucleobase14 rep C; time point 1 +0.5 -0.9 +0.4 N.D. -0.4
stress Nickel (II) chloride 1 mM -0.2 +1.0 +0.1 N.D. -1.2
stress Spectinomycin 0.01 mg/ml -0.1 +1.0 +0.2 N.D. -0.9
motility outer cut, LB soft agar motility assay -0.7 +0.7 +0.2 N.D. +0.5
stress Nickel (II) chloride 1 mM -0.0 +1.4 -0.2 N.D. -0.5
carbon source D-Galactose (C) -0.3 +2.0 -0.3 N.D. +0.0
stress RCH2 defined with Zinc 0.032 mM -0.4 +0.7 +0.0 N.D. +1.0
carbon source D-Fructose (C) +0.3 +2.2 -0.3 N.D. -0.5
carbon source m-Inositol (C) +0.1 +1.8 +0.1 N.D. -0.0
carbon source D-Galactose (C) +0.5 +2.6 +0.1 N.D. +0.2
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