Private Fitness
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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf6N2E2_4520 and Pf6N2E2_4521 are separated by 11 nucleotides
Pf6N2E2_4521 and Pf6N2E2_4522 are separated by 185 nucleotides
Pf6N2E2_4522 and Pf6N2E2_4523 are separated by 126 nucleotides
Pf6N2E2_4523 and Pf6N2E2_4524 are separated by 215 nucleotides
Pf6N2E2_4520 - hypothetical protein, at 5,254,513 to 5,256,636
_4520
Pf6N2E2_4521 - hypothetical protein, at 5,256,648 to 5,257,136
_4521
Pf6N2E2_4522 - Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-), at 5,257,322 to 5,258,446
_4522
Pf6N2E2_4523 - Esterase A, at 5,258,573 to 5,259,655
_4523
Pf6N2E2_4524 - putative cytochrome P450 hydroxylase, at 5,259,871 to 5,261,088
_4524
Group
Condition
Pf6N2E2
_4520
Pf6N2E2
_4521
Pf6N2E2
_4522
Pf6N2E2
_4523
Pf6N2E2
_4524
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.8
-0.8
-0.0
+0.0
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.7
-0.4
+0.0
-0.5
+0.2
carbon source
Ying_Nucleobase14 rep C; time point 2
-0.7
-0.1
-0.0
-0.5
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.9
-0.2
-0.3
+0.1
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 2
-0.3
+0.2
-0.2
-0.7
-0.1
stress
Nickel (II) chloride 0.0025 M
-0.0
-0.9
+0.1
-0.4
+0.1
carbon source
Ying_Nucleobase14 rep C; time point 3
-1.0
+0.3
-0.3
-0.1
+0.1
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.4
+0.1
+0.1
-0.5
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 3
-1.0
-0.0
+0.0
-0.2
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.4
+0.2
-0.2
-0.6
+0.2
carbon source
Ying_Nucleobase14 rep A; time point 3
-0.8
+0.1
-0.3
-0.0
+0.2
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.6
+0.1
+0.1
-0.5
+0.2
carbon source
Ying_Others16 rep C; time point 3
-0.7
+0.2
+0.1
-0.6
+0.3
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.9
+0.1
-0.1
-0.1
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.8
+0.0
-0.2
+0.2
+0.1
carbon source
Ying_sugar7 rep B; time point 1
-0.5
+0.5
-0.2
-0.5
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.7
+0.2
-0.2
-0.0
+0.2
carbon source
Ying_all64 rep C; time point 3
-0.6
+0.3
-0.2
-0.0
+0.1
stress
sodium iodate 0.005 M
+0.2
-0.5
-0.1
-0.2
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 3
-0.9
+0.3
-0.0
+0.2
+0.2
carbon source
Ying_Others16 rep C; time point 2
-0.5
+0.4
+0.1
-0.4
+0.1
carbon source
Ying_all64 rep A; time point 3
-0.7
+0.2
+0.1
-0.1
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.4
+0.3
-0.2
-0.2
+0.3
carbon source
Ying_Others16 rep C; time point 1
-0.7
+0.5
+0.1
-0.1
-0.0
carbon source
Ying_Others16 rep B; time point 3
-0.7
+0.3
-0.1
+0.1
+0.2
carbon source
Ying_Others16 rep A; time point 3
-0.5
+0.4
-0.1
+0.3
+0.1
lb
LB no stress 48 hours
+0.2
-0.2
-0.1
+0.4
+0.3
nitrogen source
L-Serine (N)
+0.1
+0.5
+0.4
-0.2
+0.2
lb
LB no stress 48 hours
+0.1
+0.5
-0.2
+0.3
+0.3
carbon source
D-Trehalose (C)
+0.3
+0.4
+0.4
+0.2
-0.1
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Pf6N2E2_4522
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Pf6N2E2_4524
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