Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4465 and Pf6N2E2_4466 overlap by 25 nucleotidesPf6N2E2_4466 and Pf6N2E2_4467 are separated by 113 nucleotidesPf6N2E2_4467 and Pf6N2E2_4468 are separated by 107 nucleotidesPf6N2E2_4468 and Pf6N2E2_4469 are separated by 50 nucleotides Pf6N2E2_4465 - ChaC-related protein, at 5,198,846 to 5,199,514 _4465 Pf6N2E2_4466 - Glycerol-3-phosphate transporter, at 5,199,490 to 5,200,839 _4466 Pf6N2E2_4467 - hypothetical protein, at 5,200,953 to 5,201,069 _4467 Pf6N2E2_4468 - Periplasmic protein TonB, links inner and outer membranes, at 5,201,177 to 5,201,767 _4468 Pf6N2E2_4469 - Quinone oxidoreductase (EC 1.6.5.5), at 5,201,818 to 5,202,795 _4469
Group Condition Pf6N2E2_4465 Pf6N2E2_4466 Pf6N2E2_4467 Pf6N2E2_4468 Pf6N2E2_4469
carbon source Ying_Others16 rep A; time point 1 -0.2 -0.6 -2.1 -0.5 +0.0
stress deoxycholate 0.0125 M -0.5 +0.2 -1.6 -0.3 -0.4
nitrogen source L-Serine (N) -0.5 -0.3 -0.8 -0.6 +0.0
carbon source Ying_Others16 rep B; time point 3 -0.6 -0.7 -1.1 -0.1 +0.3
stress Bile salts 0.0125 M -0.2 -0.0 -1.4 -0.1 -0.2
carbon source Ying_Others16 rep C; time point 3 -0.3 -0.4 -0.6 -0.5 +0.1
carbon source Ying_Others16 rep A; time point 3 -0.2 -0.5 -1.0 -0.3 +0.4
carbon source Ying_all64 rep C; time point 3 -0.4 +0.0 -1.1 -0.2 +0.2
stress thiosulfate 0.25 M +0.3 -0.4 -1.2 -0.1 -0.0
carbon source Ying_Others16 rep A; time point 2 -0.2 -0.3 -1.5 +0.3 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.3 -0.2 -0.9 -0.3 +0.4
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.2 -0.8 -0.5 +0.3
carbon source Ying_Nucleobase14 rep C; time point 3 -0.6 +0.0 -0.8 -0.3 +0.3
nitrogen source L-Glutamic (N) -0.3 +0.1 -1.2 +0.2 -0.0
carbon source Ying_all64 rep B; time point 3 -0.3 -0.2 -0.5 -0.6 +0.5
carbon source Ying_Nucleobase14 rep B; time point 3 -0.7 +0.0 -0.6 -0.1 +0.4
carbon source RCH2_defined +0.5 -0.4 -0.5 -0.4 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.3 +0.1 -0.7 -0.4 +0.3
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.4 +0.3 -0.8 +0.2 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 -0.1 -0.6 +0.7 +0.1 +0.3
stress antimonate 0.005 M +0.3 +1.2 +0.0 -0.1 +0.2
stress Fluorophosphate 0.125 M +0.6 +1.1 -0.5 +0.3 +0.2
stress antimonate 0.005 M +0.2 +1.2 +0.7 -0.2 -0.1
stress Doxycycline hyclate 0.0001 mg/ml -0.2 +1.0 +0.9 +0.1 +0.0
stress arsenate 0.0005 M +0.5 +0.7 +0.2 +0.1 +0.3
stress arsenate 0.0005 M +0.3 +0.6 +0.6 +0.2 +0.1
stress Fluorophosphate 0.125 M +0.8 +0.3 +0.4 +0.4 +0.6
stress phosphite 0.25 M +0.7 +1.4 +1.1 +0.2 +0.2
stress selenite 0.0025 M +0.8 +6.2 +4.2 +1.1 +0.4
stress Phosphomycin 0.004 mg/ml +3.2 +6.1 +3.9 +2.9 +1.6
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