Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4458 and Pf6N2E2_4459 are separated by 254 nucleotidesPf6N2E2_4459 and Pf6N2E2_4460 are separated by 82 nucleotidesPf6N2E2_4460 and Pf6N2E2_4461 are separated by 241 nucleotidesPf6N2E2_4461 and Pf6N2E2_4462 are separated by 135 nucleotides Pf6N2E2_4458 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 5,190,244 to 5,191,029 _4458 Pf6N2E2_4459 - Transcriptional regulator, GntR family, at 5,191,284 to 5,191,991 _4459 Pf6N2E2_4460 - Thioredoxin, at 5,192,074 to 5,192,442 _4460 Pf6N2E2_4461 - Transcription termination factor Rho, at 5,192,684 to 5,193,943 _4461 Pf6N2E2_4462 - O-antigen acetylase, at 5,194,079 to 5,196,040 _4462
Group Condition Pf6N2E2_4458 Pf6N2E2_4459 Pf6N2E2_4460 Pf6N2E2_4461 Pf6N2E2_4462
carbon source Ying_Nucleobase14 rep A; time point 3 -1.9 -1.8 N.D. N.D. -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -1.2 -1.8 N.D. N.D. -0.1
stress Bile salts 0.0125 M -0.6 -2.3 N.D. N.D. +0.1
carbon source Ying_Others16 rep A; time point 3 -0.8 -1.5 N.D. N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 -1.0 -1.2 N.D. N.D. +0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.1 -1.0 N.D. N.D. +0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 -1.4 -0.6 N.D. N.D. +0.0
carbon source Ying_Nucleobase14 rep C; time point 3 -0.9 -1.1 N.D. N.D. +0.1
carbon source Ying_all64 rep C; time point 3 -1.5 -0.3 N.D. N.D. -0.0
carbon source Ying_all64 rep A; time point 3 -1.4 -0.5 N.D. N.D. +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -1.1 -0.7 N.D. N.D. +0.1
motility inner cut, LB soft agar motility assay +0.1 -2.0 N.D. N.D. +0.3
carbon source Ying_AminoAcid20 rep C; time point 3 -1.5 -0.2 N.D. N.D. +0.1
carbon source octanoate (C) -0.1 -1.1 N.D. N.D. -0.4
carbon source Ying_AminoAcid20 rep B; time point 3 -1.1 -0.3 N.D. N.D. +0.1
carbon source Carbon source D,L-Lactate 10 mM +0.3 -1.7 N.D. N.D. -0.0
carbon source L-Leucine (C) +0.1 -1.4 N.D. N.D. +0.0
carbon source Ying_Others16 rep A; time point 1 -1.4 +0.9 N.D. N.D. +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 -0.8 +0.8 N.D. N.D. -0.2
carbon source Ying_sugar7 rep B; time point 1 -0.8 +0.9 N.D. N.D. -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -1.0 +1.3 N.D. N.D. +0.2
stress RCH2 defined with Cobalt chloride 0.04 mM -0.4 +1.0 N.D. N.D. -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.7 +1.2 N.D. N.D. +0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.4 +1.1 N.D. N.D. +0.1
stress Cobalt chloride 0.6 mM +0.4 +1.0 N.D. N.D. -0.3
lb LB no stress 48 hours +0.2 +1.2 N.D. N.D. +0.2
stress Nickel (II) chloride 1.5 mM +0.4 +1.7 N.D. N.D. +0.0
stress Hydroxylamine 0.5 M +0.6 +1.5 N.D. N.D. +0.1
stress Chloride 600 mM +0.4 +1.8 N.D. N.D. +0.1
carbon source Ying_sugar7 rep C; time point 2 +0.6 +2.5 N.D. N.D. +0.0
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