Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4447 and Pf6N2E2_4448 are separated by 106 nucleotidesPf6N2E2_4448 and Pf6N2E2_4449 are separated by 54 nucleotidesPf6N2E2_4449 and Pf6N2E2_4450 are separated by 123 nucleotidesPf6N2E2_4450 and Pf6N2E2_4451 overlap by 20 nucleotides Pf6N2E2_4447 - Cytochrome c family protein, at 5,177,785 to 5,179,572 _4447 Pf6N2E2_4448 - probable P23 protein, at 5,179,679 to 5,180,134 _4448 Pf6N2E2_4449 - Sigma cross-reacting protein 27A, at 5,180,189 to 5,180,857 _4449 Pf6N2E2_4450 - Sterol desaturase, at 5,180,981 to 5,182,216 _4450 Pf6N2E2_4451 - FIG139438: lipoprotein B, at 5,182,197 to 5,182,820 _4451
Group Condition Pf6N2E2_4447 Pf6N2E2_4448 Pf6N2E2_4449 Pf6N2E2_4450 Pf6N2E2_4451
motility inner cut, LB soft agar motility assay +0.0 -0.2 -0.1 -0.5 -5.2
motility outer cut, LB soft agar motility assay -0.1 +0.1 -0.4 -0.6 -4.7
stress Bile salts 0.0125 M -0.1 -0.8 -0.3 -0.0 -4.4
stress Gjerstad humics 0.5 M -1.1 -0.0 +0.2 -0.4 -4.3
motility inner cut, LB soft agar motility assay -0.2 +0.3 -0.5 -0.2 -4.7
stress deoxycholate 0.0125 M -0.0 -0.2 -0.3 -0.2 -4.5
stress Gjerstad humics 0.5 M -1.2 -0.5 +0.3 -0.6 -3.1
motility inner cut, LB soft agar motility assay -0.1 +0.5 +0.0 -0.4 -4.9
stress Nickel (II) chloride 0.0025 M -2.4 -0.1 -0.8 -0.3 -1.1
stress Nickel (II) chloride 0.0025 M -2.8 -0.0 -0.1 -0.1 -1.3
motility outer cut, LB soft agar motility assay -0.1 -0.4 +0.0 -0.3 -3.3
stress sodium iodate 0.005 M -0.1 -0.6 -0.2 -0.1 -2.8
stress Aluminum chloride 4 mM -0.8 -1.7 -0.2 +0.3 -1.1
stress Benzethonium chloride 0.02 mM -0.0 -0.7 +0.2 -0.4 -2.6
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.2 -1.2 +0.5 +0.2 -2.7
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.2 -0.4 +0.1 +0.1 -2.7
carbon source Ying_AminoAcid20 rep A; time point 2 -0.4 -1.1 +0.0 +0.1 -1.7
stress 4-Hydroxyacetophenone 0.00025 M +0.0 -0.0 +0.3 -0.2 -3.0
stress 4-Hydroxyacetophenone 0.00025 M -0.1 +0.3 +0.1 -0.2 -3.0
carbon source Trisodium citrate (C) -3.0 -0.5 +0.1 -0.2 +0.9
stress sodium iodate 0.005 M -0.0 +0.3 +0.2 -0.0 -2.9
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.2 -0.4 +0.4 +0.2 -2.2
carbon source Ying_Nucleobase14 rep A; time point 2 -0.2 -0.9 +0.0 +0.3 +2.2
carbon source Ying_Nucleobase14 rep A; time point 3 -0.3 -1.1 -0.1 +0.3 +2.8
carbon source Ying_Nucleobase14 rep B; time point 3 -0.2 -1.1 -0.1 +0.4 +2.9
carbon source Ying_sugar7 rep B; time point 2 +0.1 -0.1 -0.2 +0.2 +3.2
carbon source Ying_sugar7 rep B; time point 1 -0.2 +0.4 +0.5 +0.2 +2.2
carbon source Ying_Nucleobase14 rep C; time point 3 -0.2 -0.3 +0.3 +0.3 +3.3
stress Rifampicin 0.003 mg/ml +0.1 -0.1 +0.1 +0.2 +3.9
carbon source Ying_sugar7 rep C; time point 2 -0.2 +1.2 +0.3 +0.4 +3.2
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