Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4414 and Pf6N2E2_4415 are separated by 207 nucleotidesPf6N2E2_4415 and Pf6N2E2_4416 overlap by 4 nucleotidesPf6N2E2_4416 and Pf6N2E2_4417 are separated by 2 nucleotidesPf6N2E2_4417 and Pf6N2E2_4418 are separated by 13 nucleotides Pf6N2E2_4414 - FIG00953808: hypothetical protein, at 5,148,368 to 5,148,691 _4414 Pf6N2E2_4415 - Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase, at 5,148,899 to 5,149,603 _4415 Pf6N2E2_4416 - Tyrosine recombinase XerC, at 5,149,600 to 5,150,499 _4416 Pf6N2E2_4417 - Protein of unknown function DUF484, at 5,150,502 to 5,151,224 _4417 Pf6N2E2_4418 - Diaminopimelate epimerase (EC 5.1.1.7), at 5,151,238 to 5,152,068 _4418
Group Condition Pf6N2E2_4414 Pf6N2E2_4415 Pf6N2E2_4416 Pf6N2E2_4417 Pf6N2E2_4418
carbon source octanoate (C) -7.0 +0.0 -0.7 -2.9 -4.0
stress DEANONOate 0.000625 M -1.4 +0.4 -4.8 -1.6 -4.5
stress DEANONOate 0.000625 M +0.3 -1.1 -4.0 -0.6 -4.4
carbon source octanoate (C) -4.0 +0.4 -2.6 -2.2 -0.9
carbon source D-Sorbitol (C) -0.9 -0.6 -1.4 -1.5 -3.7
nitrogen source nitrogen source nitrate 20mM -2.7 -2.5 -1.2 -0.7 -1.0
nitrogen source L-Alanine (N) +0.4 -0.8 -1.3 -1.9 -4.0
stress Lomefloxacin 0.0002 mM +0.8 +0.2 -4.8 -1.5 -2.2
motility outer cut, LB soft agar motility assay +1.9 -0.4 -2.7 -2.1 -3.8
nitrogen source L-Asparagine (N) +0.2 +0.5 -2.2 -1.5 -3.8
stress Vancomycin 0.24 mg/ml -2.3 +0.3 -2.6 -2.4 +0.7
stress Nalidixic 0.008 mg/ml -0.7 +0.6 -3.2 -3.0 +0.1
lb LB no stress 24 hours +0.6 -0.3 -4.3 -0.7 -1.4
nitrogen source Parabanic Acid (N) +1.3 +0.3 -1.4 -3.6 -2.7
stress Rifampicin 0.003 mg/ml -3.0 +0.3 -2.2 -2.9 +2.1
lb LB no stress 48 hours +0.9 +0.4 -3.1 -1.1 -2.3
stress Bile salts 0.0125 M -0.1 -0.3 -2.1 -4.4 +1.7
stress Calcium chloride 0.0125 M +0.8 -1.0 -3.7 +0.4 -1.4
motility inner cut, LB soft agar motility assay +1.6 +0.3 -3.2 -2.8 -0.1
carbon source L-Leucine (C) +2.1 -0.4 -2.4 -0.9 -2.8
nitrogen source L-Histidine (N) +1.4 +0.6 -1.4 -1.0 -3.9
motility outer cut, LB soft agar motility assay +1.6 +0.6 -2.6 -3.2 -0.3
motility inner cut, LB soft agar motility assay +2.8 +0.9 -3.6 -2.3 -1.4
carbon source L-Leucine (C) +1.8 +0.5 -2.3 -0.3 -3.0
motility inner cut, LB soft agar motility assay +2.5 -1.0 -2.7 -3.2 +1.2
stress Hydroxylamine 0.5 M -2.9 -0.9 -1.7 +0.1 +2.5
carbon source L-Histidine (C) +2.4 -0.0 -1.3 +0.2 -3.8
stress deoxycholate 0.0125 M -0.1 +0.7 -2.0 -2.8 +1.7
stress Choline Lysine 20 mM +2.6 +0.6 -2.6 -0.4 -1.1
carbon source D-Alanine (C) +5.0 +0.2 -0.8 -0.5 -3.3
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