Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4289 and Pf6N2E2_4290 are separated by 173 nucleotidesPf6N2E2_4290 and Pf6N2E2_4291 are separated by 11 nucleotidesPf6N2E2_4291 and Pf6N2E2_4292 are separated by 376 nucleotidesPf6N2E2_4292 and Pf6N2E2_4293 are separated by 351 nucleotides Pf6N2E2_4289 - hypothetical protein, at 4,996,557 to 5,001,158 _4289 Pf6N2E2_4290 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 5,001,332 to 5,002,432 _4290 Pf6N2E2_4291 - Deacetylases, including yeast histone deacetylase and acetoin utilization protein, at 5,002,444 to 5,003,475 _4291 Pf6N2E2_4292 - hypothetical protein, at 5,003,852 to 5,004,418 _4292 Pf6N2E2_4293 - Lipase family protein, at 5,004,770 to 5,006,947 _4293
Group Condition Pf6N2E2_4289 Pf6N2E2_4290 Pf6N2E2_4291 Pf6N2E2_4292 Pf6N2E2_4293
carbon source Ying_all64 rep B; time point 3 -0.2 -0.3 -0.5 -0.4 -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 -0.4 -0.5 -0.4 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.1 -0.1 -0.6 -0.3 -0.3
carbon source Ying_all64 rep A; time point 3 -0.1 +0.0 -0.6 -0.6 -0.1
carbon source Ying_Others16 rep B; time point 3 -0.0 -0.1 -0.7 -0.3 -0.2
carbon source Ying_Nucleobase14 rep C; time point 3 -0.0 -0.4 -0.5 -0.3 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.0 -0.1 -0.4 -0.5 -0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -0.2 -0.1 -0.5 -0.2 -0.1
carbon source Ying_Nucleobase14 rep A; time point 3 -0.0 -0.3 -0.5 -0.2 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.0 -0.3 -0.5 -0.3
carbon source Ying_all64 rep C; time point 3 -0.0 -0.1 -0.6 -0.4 -0.0
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -0.1 -0.4 -0.3 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.1 -0.5 -0.1 -0.2 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -0.2 -0.4 -0.0 -0.2 -0.2
carbon source Ying_Others16 rep C; time point 3 -0.1 -0.0 -0.7 -0.0 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.1 -0.3 -0.2 -0.3 -0.0
carbon source Ying_sugar7 rep B; time point 1 -0.2 +0.0 -0.1 -0.3 -0.1
carbon source Ying_Others16 rep C; time point 2 -0.1 +0.1 -0.3 -0.5 -0.0
carbon source Ying_Others16 rep A; time point 1 -0.2 -0.1 +0.1 -0.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 2 -0.2 +0.3 -0.4 -0.4 +0.0
carbon source Ying_sugar7 rep C; time point 2 +0.0 +0.1 -0.3 -0.3 -0.0
nitrogen source L-Serine (N) -0.0 -0.3 +0.0 -0.3 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.3 -0.3 -0.0 +0.0
carbon source Ying_sugar7 rep B; time point 2 -0.0 +0.2 -0.3 -0.2 -0.0
stress RCH2 defined with Cobalt chloride 0.04 mM +0.3 +0.0 -0.5 -0.2 +0.1
stress Bile salts 0.0125 M +0.0 -0.1 +0.4 -0.4 -0.1
carbon source Ying_Others16 rep B; time point 2 -0.1 +0.3 -0.2 -0.2 +0.1
stress Aluminum chloride 4 mM -0.1 +0.2 -0.2 -0.2 +0.2
stress 4-Hydroxyacetophenone 0.00025 M +0.0 -0.0 -0.3 +0.4 -0.0
stress periodate 0.00125 M +0.1 +0.3 +0.2 -0.3 +0.0
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