Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4266 and Pf6N2E2_4267 are separated by 12 nucleotidesPf6N2E2_4267 and Pf6N2E2_4268 are separated by 119 nucleotidesPf6N2E2_4268 and Pf6N2E2_4269 are separated by 106 nucleotidesPf6N2E2_4269 and Pf6N2E2_4270 are separated by 304 nucleotides Pf6N2E2_4266 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 4,963,628 to 4,964,593 _4266 Pf6N2E2_4267 - FIG00957502: hypothetical protein, at 4,964,606 to 4,965,028 _4267 Pf6N2E2_4268 - Pyridoxal kinase (EC 2.7.1.35), at 4,965,148 to 4,966,020 _4268 Pf6N2E2_4269 - cytosolic long-chain acyl-CoA thioester hydrolase family protein, at 4,966,127 to 4,966,585 _4269 Pf6N2E2_4270 - putative Glutathione-regulated potassium-efflux system protein KefB, at 4,966,890 to 4,968,653 _4270
Group Condition Pf6N2E2_4266 Pf6N2E2_4267 Pf6N2E2_4268 Pf6N2E2_4269 Pf6N2E2_4270
carbon source Ying_AminoAcid20 rep C; time point 3 -0.7 +0.0 +0.1 -1.0 +0.1
carbon source Ying_all64 rep B; time point 3 -0.6 -0.3 +0.3 -0.6 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.7 -0.1 +0.3 -0.8 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.2 -0.1 +0.2 -0.8 -0.3
stress RCH2 defined with Zinc 0.016 mM -0.3 -0.7 +0.0 +0.1 -0.2
stress molybdate 0.25 M -0.4 -0.5 +0.0 -0.3 +0.2
carbon source Ying_Nucleobase14 rep B; time point 3 -0.3 -0.1 +0.4 -0.8 -0.1
stress RCH2 defined with Zinc 0.032 mM -0.0 -1.0 +0.4 -0.0 -0.1
carbon source D-Galactose (C) -0.2 -0.6 -0.1 -0.2 +0.3
stress nitrate 0.125 M -0.1 -0.2 +0.3 -0.4 -0.4
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A -0.2 +0.5 -0.3 -0.3 -0.4
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.1 +0.1 -0.9 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 -0.5 +0.4 +0.2 -0.6 +0.2
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B +0.1 +0.5 -0.3 -0.3 -0.3
carbon source Ying_AminoAcid20 rep B; time point 2 -0.0 -0.0 +0.5 -0.8 +0.1
carbon source Ying_sugar7 rep C; time point 1 +0.1 -0.2 +0.9 -0.8 +0.0
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 +0.1 +0.3 -0.6 +0.3
nitrogen source nitrogen source nitrite 5mM +0.1 -0.4 -0.2 +0.4 +0.3
carbon source Trisodium citrate (C) +0.3 +0.1 -0.5 +0.5 -0.0
stress Nickel (II) chloride 0.0025 M -0.1 -0.4 +0.5 +0.2 +0.3
carbon source Ying_sugar7 rep B; time point 1 -0.5 +0.1 +0.8 -0.4 +0.4
stress Doxycycline hyclate 0.0001 mg/ml +0.1 -0.3 +0.3 +0.5 -0.2
carbon source L-Lactate (C) -0.1 -0.3 +0.1 +0.1 +0.8
stress RCH2 defined with Cobalt chloride 0.04 mM +0.1 -0.8 +1.0 +0.3 +0.1
stress RCH2 defined with Cobalt chloride 0.04 mM +0.0 -0.3 +1.2 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 +0.3 +0.4 -0.3 +0.2
carbon source succinate (C) -0.2 +0.3 -0.2 +0.2 +0.8
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.1 +1.5 -0.5 +0.2
carbon source L-Lactate (C) -0.0 +0.2 +0.1 -0.1 +0.9
carbon source Ying_sugar7 rep B; time point 2 -0.1 -0.1 +1.4 -0.0 +0.6
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