Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4248 and Pf6N2E2_4249 are separated by 153 nucleotidesPf6N2E2_4249 and Pf6N2E2_4250 overlap by 14 nucleotidesPf6N2E2_4250 and Pf6N2E2_4251 are separated by 173 nucleotidesPf6N2E2_4251 and Pf6N2E2_4252 are separated by 220 nucleotides Pf6N2E2_4248 - SAM-dependent methyltransferases, at 4,941,781 to 4,942,605 _4248 Pf6N2E2_4249 - FIG01055313: hypothetical protein, at 4,942,759 to 4,943,952 _4249 Pf6N2E2_4250 - FIG00964095: hypothetical protein, at 4,943,939 to 4,946,089 _4250 Pf6N2E2_4251 - Dihydrolipoamide dehydrogenase (EC 1.8.1.4), at 4,946,263 to 4,947,663 _4251 Pf6N2E2_4252 - Membrane protease subunits, stomatin/prohibitin homologs, at 4,947,884 to 4,949,845 _4252
Group Condition Pf6N2E2_4248 Pf6N2E2_4249 Pf6N2E2_4250 Pf6N2E2_4251 Pf6N2E2_4252
carbon source Ying_Nucleobase14 rep C; time point 1 -0.9 -0.4 -0.3 -0.3 -0.0
carbon source Ying_Nucleobase14 rep A; time point 2 -0.5 -0.4 -0.2 -0.2 -0.4
carbon source Ying_Nucleobase14 rep B; time point 2 -0.0 -0.3 -0.3 -0.2 -0.4
carbon source Putrescine (C) -0.5 -0.2 -0.3 -0.1 -0.1
stress deoxycholate 0.0125 M -1.1 +0.3 -0.6 +0.2 +0.1
carbon source Ying_Nucleobase14 rep C; time point 2 -0.4 -0.2 -0.2 -0.3 -0.0
nitrogen source nitrogen source nitrate 20mM -0.3 -0.1 -0.0 -0.3 -0.5
stress thiosulfate 0.25 M -0.5 -0.4 -0.2 -0.0 +0.0
nitrogen source L-Serine (N) -0.3 -0.4 -0.2 +0.0 -0.3
stress rubidium chloride 0.25 M -0.4 -0.4 -0.3 -0.0 +0.1
carbon source Ying_sugar7 rep B; time point 2 -1.0 -0.0 -0.0 -0.1 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.2 -0.4 -0.2 -0.1 -0.5
stress RCH2 defined with Cobalt chloride 0.04 mM -0.4 -0.2 +0.4 -0.0 -0.5
carbon source D-Trehalose (C) -0.3 -0.0 -0.1 +0.1 -0.5
carbon source Ying_Others16 rep C; time point 1 -0.4 +0.2 -0.1 -0.2 -0.2
motility inner cut, LB soft agar motility assay +0.2 +0.1 -0.3 -0.0 -0.6
stress Phosphomycin 0.004 mg/ml -0.2 -0.6 +0.4 +0.1 -0.2
stress DEANONOate 0.000625 M -0.4 -0.3 +0.3 -0.1 +0.0
motility inner cut, LB soft agar motility assay +0.3 -0.1 -0.4 +0.0 -0.3
stress thiosulfate 0.25 M -0.2 -0.5 -0.1 +0.1 +0.4
stress Nickel (II) chloride 0.0025 M -0.3 -0.4 +0.2 +0.2 +0.0
motility inner cut, LB soft agar motility assay +0.5 +0.1 -0.4 -0.2 -0.2
stress Hydroxylamine 0.5 M +0.9 +0.5 -1.4 -0.3 +0.2
stress Cobalt chloride 0.6 mM -0.5 -0.2 +0.3 +0.1 +0.1
stress Choline Lysine 20 mM +0.2 +0.7 -0.9 -0.1 -0.0
stress dimethyl sulfone 0.25 M +0.4 +0.2 -0.3 -0.1 -0.3
nitrogen source nitrogen source nitrate 20mM +0.5 -0.1 +0.1 -0.2 -0.4
stress molybdate 0.25 M +0.2 +0.3 -0.4 +0.1 +0.1
nitrogen source nitrogen source nitrate 5mM +0.5 -0.1 +0.1 -0.2 +0.2
stress Bile salts 0.0125 M +0.5 +0.7 -0.5 -0.1 +0.2
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