Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_4242 and Pf6N2E2_4243 overlap by 4 nucleotidesPf6N2E2_4243 and Pf6N2E2_4244 are separated by 516 nucleotidesPf6N2E2_4244 and Pf6N2E2_4245 overlap by 7 nucleotidesPf6N2E2_4245 and Pf6N2E2_4246 are separated by 95 nucleotides Pf6N2E2_4242 - GDP-mannose 4,6-dehydratase (EC 4.2.1.47), at 4,934,532 to 4,935,500 _4242 Pf6N2E2_4243 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 4,935,497 to 4,936,321 _4243 Pf6N2E2_4244 - Glycosyltransferase, at 4,936,838 to 4,938,481 _4244 Pf6N2E2_4245 - Glycosyltransferase (EC 2.4.1.-), at 4,938,475 to 4,939,767 _4245 Pf6N2E2_4246 - SAM-dependent methyltransferases, at 4,939,863 to 4,940,636 _4246
Group Condition Pf6N2E2_4242 Pf6N2E2_4243 Pf6N2E2_4244 Pf6N2E2_4245 Pf6N2E2_4246
stress RCH2 defined with Cobalt chloride 0.04 mM -0.3 -0.6 -0.3 -0.4 -0.9
carbon source Ying_Nucleobase14 rep A; time point 3 -0.1 -0.1 -0.9 -0.9 -0.2
carbon source D-Trehalose (C) -0.1 -0.3 -0.4 -0.7 -0.6
carbon source Ying_Nucleobase14 rep C; time point 3 +0.2 -0.2 -1.0 -0.8 -0.2
carbon source Ying_Nucleobase14 rep B; time point 3 +0.0 +0.2 -1.1 -0.7 -0.4
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 -0.8 -0.1 -0.3 -0.6
carbon source D-Trehalose (C) -0.5 -0.1 -0.4 -0.5 -0.2
carbon source L-Leucine (C) +0.1 +0.0 -0.7 -0.6 -0.5
carbon source L-Leucine (C) +0.1 +0.0 -0.8 -0.7 -0.2
motility outer cut, LB soft agar motility assay -0.4 -0.3 -0.1 -0.1 -0.7
carbon source L-Histidine (C) -0.1 -0.1 -0.5 -0.3 -0.6
carbon source Ying_Nucleobase14 rep C; time point 2 -0.1 +0.0 -0.5 -0.7 -0.2
nitrogen source Urea (N) -0.3 +0.0 -0.5 -0.4 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.4 -0.5 -0.0 -0.2 -0.4
carbon source Ying_Nucleobase14 rep B; time point 2 -0.3 +0.1 -0.8 -0.5 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 +0.2 -0.8 -0.4 -0.4
carbon source L-Histidine (C) +0.0 -0.2 -0.5 -0.4 -0.3
carbon source D-Fructose (C) +0.1 +0.0 -0.5 -0.6 -0.3
stress Cobalt chloride 0.6 mM -0.2 -0.8 -0.0 -0.2 +0.1
nitrogen source Cytosine (N) +0.3 -0.3 -0.5 -0.3 -0.4
nitrogen source Cytidine (N) +0.2 +0.1 -0.5 -0.3 -0.5
nitrogen source Cytosine (N) +0.2 -0.1 -0.4 -0.4 -0.2
stress Bile salts 0.0125 M +0.2 -0.8 +0.1 -0.2 -0.1
lb LB no stress 48 hours +0.4 -0.2 -0.2 -0.1 -0.4
stress Aluminum chloride 4 mM -0.1 +0.4 +0.3 -0.1 -0.4
carbon source Ying_Others16 rep C; time point 2 +0.4 -0.2 -0.2 -0.1 +0.4
nitrogen source nitrogen source nitrate 20mM +0.6 +0.2 +0.2 +0.1 +0.2
nitrogen source nitrogen source nitrite 0.5mM +0.5 +0.4 +0.2 +0.1 +0.1
nitrogen source nitrogen source nitrate 5mM +0.2 +0.5 +0.3 +0.1 +0.3
nitrogen source nitrogen source nitrate 5mM +0.1 +0.4 +0.4 +0.3 +0.4
remove
Pf6N2E2_4242
plot		 remove
Pf6N2E2_4243
plot		 remove
Pf6N2E2_4244		 remove
Pf6N2E2_4245
plot		 remove
Pf6N2E2_4246
plot