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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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500 nt
Pf6N2E2_4161 and Pf6N2E2_4162 are separated by 374 nucleotides
Pf6N2E2_4162 and Pf6N2E2_4163 are separated by 74 nucleotides
Pf6N2E2_4163 and Pf6N2E2_4164 are separated by 59 nucleotides
Pf6N2E2_4164 and Pf6N2E2_4165 are separated by 165 nucleotides
Pf6N2E2_4161 - GTP-binding protein EngB, at 4,842,302 to 4,842,943
_4161
Pf6N2E2_4162 - DNA polymerase I (EC 2.7.7.7), at 4,843,318 to 4,846,086
_4162
Pf6N2E2_4163 - FIG00953549: hypothetical protein, at 4,846,161 to 4,846,448
_4163
Pf6N2E2_4164 - Homoserine kinase (EC 2.7.1.39), at 4,846,508 to 4,847,458
_4164
Pf6N2E2_4165 - Zinc ABC transporter, periplasmic-binding protein ZnuA, at 4,847,624 to 4,848,553
_4165
Group
Condition
Pf6N2E2
_4161
Pf6N2E2
_4162
Pf6N2E2
_4163
Pf6N2E2
_4164
Pf6N2E2
_4165
stress
Chloride 600 mM
N.D.
-4.2
-0.7
N.D.
-0.6
stress
Chloride 500 mM
N.D.
-4.4
+0.2
N.D.
-0.4
stress
Cisplatin 0.008 mg/ml
N.D.
-3.6
-0.3
N.D.
-0.7
stress
L-Lysine 25 mM
N.D.
-4.1
-0.1
N.D.
-0.3
stress
D-Cycloserine 0.12 mg/ml
N.D.
-3.3
-0.4
N.D.
-0.8
stress
Chloride 500 mM
N.D.
-3.6
-0.5
N.D.
-0.3
stress
Cerium(III) chloride 0.000195313 M
N.D.
-3.7
-0.3
N.D.
-0.1
motility
outer cut, LB soft agar motility assay
N.D.
-2.0
+0.0
N.D.
-2.0
motility
inner cut, LB soft agar motility assay
N.D.
-1.6
-0.8
N.D.
-1.6
stress
Vancomycin 0.24 mg/ml
N.D.
-3.0
-0.6
N.D.
-0.3
stress
Choline Lysine 20 mM
N.D.
-3.3
-0.3
N.D.
-0.1
motility
inner cut, LB soft agar motility assay
N.D.
-1.3
-0.8
N.D.
-1.7
stress
sodium bromide 0.0125 M
N.D.
-3.6
+0.1
N.D.
-0.2
stress
Calcium chloride 0.0125 M
N.D.
-3.1
-0.1
N.D.
-0.5
stress
Zinc chloride 0.0000015625 M
N.D.
-1.7
-0.6
N.D.
-1.2
stress
DEANONOate 0.000625 M
N.D.
-3.2
+0.4
N.D.
-0.6
stress
DEANONOate 0.000625 M
N.D.
-2.4
-0.3
N.D.
-0.6
stress
5-Hydroxymethylfurfural 10 mM
N.D.
-1.6
+0.1
N.D.
-1.8
stress
Aluminum chloride 2 mM
N.D.
-2.9
-0.2
N.D.
-0.2
carbon source
D-Lactate (C)
N.D.
-1.1
-0.2
N.D.
-1.9
stress
perchlorate 50 mM
N.D.
-3.2
+0.1
N.D.
-0.2
stress
copper (II) chloride 3 mM
N.D.
-2.7
-0.7
N.D.
+0.2
stress
Calcium chloride 0.0125 M
N.D.
-2.7
+0.3
N.D.
-0.8
stress
Spectinomycin 0.0125 mg/ml
N.D.
-3.1
+0.2
N.D.
-0.1
stress
Aluminum chloride 4 mM
N.D.
-3.6
-0.1
N.D.
+0.7
stress
Chloramphenicol 0.004 mg/ml
N.D.
-2.6
-0.4
N.D.
+0.3
stress
chromate 0.0000015625 M
N.D.
-3.4
+0.6
N.D.
+0.3
stress
Tetracycline 0.0002 mg/ml
N.D.
-2.8
-0.2
N.D.
+0.7
stress
Doxycycline hyclate 0.0001 mg/ml
N.D.
-2.4
-0.1
N.D.
+1.4
stress
bromate 0.05 M
N.D.
+1.5
-1.6
N.D.
-0.4
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