Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4120 and Pf6N2E2_4121 are separated by 24 nucleotidesPf6N2E2_4121 and Pf6N2E2_4122 overlap by 4 nucleotidesPf6N2E2_4122 and Pf6N2E2_4123 are separated by 70 nucleotidesPf6N2E2_4123 and Pf6N2E2_4124 are separated by 167 nucleotides Pf6N2E2_4120 - Trk system potassium uptake protein TrkA, at 4,798,826 to 4,800,199 _4120 Pf6N2E2_4121 - Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-), at 4,800,224 to 4,801,534 _4121 Pf6N2E2_4122 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 4,801,531 to 4,802,490 _4122 Pf6N2E2_4123 - Peptide deformylase (EC 3.5.1.88), at 4,802,561 to 4,803,067 _4123 Pf6N2E2_4124 - Uncharacterized protein with LysM domain, COG1652, at 4,803,235 to 4,804,260 _4124
Group Condition Pf6N2E2_4120 Pf6N2E2_4121 Pf6N2E2_4122 Pf6N2E2_4123 Pf6N2E2_4124
nitrogen source nitrogen source Ammonium chloride 20mM -0.8 -2.8 N.D. N.D. -0.8
nitrogen source nitrogen source nitrate 5mM -0.8 -3.2 N.D. N.D. -0.5
nitrogen source nitrogen source nitrite 1mM -1.0 -2.2 N.D. N.D. -0.9
motility inner cut, LB soft agar motility assay -2.9 -0.7 N.D. N.D. -0.4
nitrogen source nitrogen source nitrite 0.5mM -0.8 -2.3 N.D. N.D. -0.8
nitrogen source nitrogen source nitrate 20mM -0.9 -2.1 N.D. N.D. -0.6
nitrogen source nitrogen source nitrite 1mM -0.7 -1.6 N.D. N.D. -1.0
nitrogen source nitrogen source nitrite 5mM -0.9 -1.5 N.D. N.D. -0.6
carbon source propionate (C) -2.2 -0.6 N.D. N.D. -0.0
nitrogen source nitrogen source nitrite 5mM -0.8 -1.1 N.D. N.D. -0.9
nitrogen source L-Serine (N) -0.6 -2.4 N.D. N.D. +0.2
nitrogen source nitrogen source nitrate 20mM -0.8 -1.1 N.D. N.D. -0.8
nitrogen source nitrogen source nitrite 0.5mM -0.5 -1.3 N.D. N.D. -0.8
nitrogen source nitrogen source Ammonium chloride 20mM -0.7 -1.2 N.D. N.D. -0.6
stress Cobalt chloride 0.6 mM -2.5 +0.3 N.D. N.D. -0.1
stress Cobalt chloride 0.6 mM -2.6 +0.3 N.D. N.D. -0.0
stress Cobalt chloride 0.6 mM -2.2 +0.2 N.D. N.D. +0.1
stress Cobalt chloride 0.6 mM -2.0 +1.0 N.D. N.D. -0.5
stress Nickel (II) chloride 0.0025 M -1.4 +1.4 N.D. N.D. -0.0
stress RCH2 defined with Cobalt chloride 0.04 mM -2.1 +3.0 N.D. N.D. -0.5
stress RCH2 defined with Cobalt chloride 0.04 mM -2.3 +3.0 N.D. N.D. -0.0
stress bromate 0.05 M +2.8 -0.2 N.D. N.D. -0.4
carbon source D-Alanine (C) +1.1 +1.4 N.D. N.D. -0.2
stress Phosphomycin 0.004 mg/ml +1.8 +0.7 N.D. N.D. +0.3
stress Rifampicin 0.003 mg/ml +1.6 +1.3 N.D. N.D. -0.0
carbon source D-Galactose (C) +1.6 +1.3 N.D. N.D. +0.2
carbon source D-Fructose (C) +1.6 +1.5 N.D. N.D. -0.1
stress DEANONOate 0.000625 M +2.3 +1.1 N.D. N.D. -0.2
carbon source D-Galactose (C) +2.0 +1.6 N.D. N.D. -0.0
stress DEANONOate 0.000625 M +2.6 +1.2 N.D. N.D. -0.0
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