Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_4104 and Pf6N2E2_4105 are separated by 10 nucleotidesPf6N2E2_4105 and Pf6N2E2_4106 overlap by 13 nucleotidesPf6N2E2_4106 and Pf6N2E2_4107 overlap by 4 nucleotidesPf6N2E2_4107 and Pf6N2E2_4108 are separated by 646 nucleotides Pf6N2E2_4104 - Probable transmembrane protein, at 4,783,803 to 4,784,396 _4104 Pf6N2E2_4105 - Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA, at 4,784,407 to 4,785,486 _4105 Pf6N2E2_4106 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 4,785,474 to 4,786,373 _4106 Pf6N2E2_4107 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 4,786,370 to 4,787,005 _4107 Pf6N2E2_4108 - hypothetical protein, at 4,787,652 to 4,788,014 _4108
Group Condition Pf6N2E2_4104 Pf6N2E2_4105 Pf6N2E2_4106 Pf6N2E2_4107 Pf6N2E2_4108
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.7 -0.9 -1.0 -0.4 -0.3
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.0 -0.8 -1.1 -0.1 -0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.7 -0.8 -1.1 -0.0 -0.0
nitrogen source nitrogen source nitrite 1mM -0.3 -0.0 -0.4 -0.6 -0.3
nitrogen source nitrogen source nitrite 1mM -0.3 -0.2 -0.3 -0.6 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 -0.8 -0.7 -0.1 +0.0
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.5 -0.6 -0.6 +0.1 +0.2
carbon source Ying_sugar7 rep B; time point 1 -0.3 -0.7 -0.3 -0.1 +0.0
motility inner cut, LB soft agar motility assay +0.1 -0.1 -0.1 -1.0 -0.2
motility inner cut, LB soft agar motility assay +0.1 -0.2 +0.1 -0.9 -0.4
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.5 -0.5 -0.5 +0.1 +0.2
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.3 -0.5 -0.6 +0.0 +0.2
carbon source Ying_Others16 rep C; time point 1 -0.1 -0.5 -0.5 -0.2 +0.4
carbon source Ying_Others16 rep A; time point 2 +0.4 -0.5 -0.4 -0.3 -0.0
stress Aluminum chloride 0.00005 M -0.1 +0.1 -0.0 -1.0 +0.2
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.3 -0.5 -0.3 +0.2 +0.1
motility outer cut, LB soft agar motility assay +0.2 +0.1 -0.4 -0.6 -0.1
stress dimethyl sulfone 0.25 M -0.3 +0.3 -0.3 -0.6 +0.3
motility inner cut, LB soft agar motility assay -0.5 +0.2 -0.2 -0.5 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.3 -0.4 -0.3 -0.3 +0.2
stress nitrate 0.125 M -0.4 +0.4 +0.1 -0.2 -0.3
carbon source Ying_Nucleobase14 rep B; time point 3 +0.4 +0.3 -0.4 -0.1 -0.2
stress DEANONOate 0.000625 M -0.5 -0.3 -0.1 +0.9 +0.1
stress DEANONOate 0.000625 M -0.7 -0.1 +0.2 +0.9 +0.1
stress Doxycycline hyclate 0.0001 mg/ml +0.1 -0.2 +0.0 +0.9 -0.3
stress sodium iodate 0.005 M -0.2 +0.1 -0.1 +1.1 -0.2
stress RCH2 defined with Cobalt chloride 0.04 mM +0.1 +0.6 -0.1 +0.3 +0.4
carbon source L-Leucine (C) +0.1 +0.4 +0.3 +0.3 +0.4
carbon source D-Alanine (C) +0.6 +0.6 +0.3 -0.0 +0.1
stress Hydroxylamine 0.5 M +0.4 +0.2 -0.2 +1.3 -0.2
remove
Pf6N2E2_4104
plot		 remove
Pf6N2E2_4105
plot		 remove
Pf6N2E2_4106		 remove
Pf6N2E2_4107
plot		 remove
Pf6N2E2_4108
plot