Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3984 and Pf6N2E2_3985 are separated by 232 nucleotidesPf6N2E2_3985 and Pf6N2E2_3986 are separated by 685 nucleotidesPf6N2E2_3986 and Pf6N2E2_3987 overlap by 4 nucleotidesPf6N2E2_3987 and Pf6N2E2_3988 are separated by 10 nucleotides Pf6N2E2_3984 - T1SS associated transglutaminase-like cysteine proteinase LapP, at 4,650,403 to 4,651,065 _3984 Pf6N2E2_3985 - Predicted regulator PutR for proline utilization, GntR family, at 4,651,298 to 4,651,990 _3985 Pf6N2E2_3986 - PROBABLE REMNANT OF A TRANSPOSASE GENE PROTEIN, at 4,652,676 to 4,653,452 _3986 Pf6N2E2_3987 - FIG00953743: hypothetical protein, at 4,653,449 to 4,654,381 _3987 Pf6N2E2_3988 - Non-ribosomal peptide synthetase modules and related proteins, at 4,654,392 to 4,657,811 _3988
Group Condition Pf6N2E2_3984 Pf6N2E2_3985 Pf6N2E2_3986 Pf6N2E2_3987 Pf6N2E2_3988
nitrogen source Glucuronamide (N) -4.1 -0.5 -0.2 -0.1 -0.1
nitrogen source nitrogen source nitrite 5mM -4.0 -0.5 -0.4 -0.0 +0.1
nitrogen source nitrogen source nitrite 0.5mM -4.1 -0.3 -0.0 +0.0 +0.1
nitrogen source nitrogen source nitrite 0.5mM -4.1 -0.2 +0.2 -0.1 +0.1
nitrogen source nitrogen source nitrate 20mM -3.8 -0.1 +0.0 -0.0 -0.1
nitrogen source Glucuronamide (N) -4.1 -0.0 +0.4 -0.1 -0.0
nitrogen source L-Serine (N) -3.3 +0.0 +0.1 -0.6 -0.1
nitrogen source nitrogen source nitrite 5mM -3.6 -0.1 -0.2 -0.0 +0.3
nitrogen source nitrogen source Ammonium chloride 20mM -3.5 +0.1 -0.6 +0.5 +0.1
nitrogen source nitrogen source nitrite 1mM -3.9 +0.2 +0.3 -0.1 +0.1
nitrogen source nitrogen source nitrate 20mM -3.5 +0.3 -0.4 -0.0 +0.2
nitrogen source Gly-Glu (N) -2.1 -0.2 -0.3 -0.4 -0.3
carbon source D-Glucose (C) -2.4 -0.3 -0.1 -0.5 -0.1
nitrogen source nitrogen source nitrite 1mM -3.5 +0.1 -0.1 +0.2 +0.1
carbon source D-Trehalose (C) -2.5 -0.1 -0.3 -0.2 -0.2
nitrogen source L-Aspartic Acid (N) -2.2 -0.3 -0.3 -0.4 -0.0
nitrogen source L-Glutamine (N) -2.3 +0.0 -0.2 -0.7 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM -3.6 +0.3 -0.0 +0.2 +0.1
nitrogen source L-Aspartic Acid (N) -2.4 -0.2 +0.2 -0.5 +0.1
carbon source D-Galactose (C) -2.5 +0.2 -0.3 -0.0 -0.1
nitrogen source nitrogen source nitrate 5mM -3.3 +0.3 -0.3 +0.4 +0.2
carbon source L-Leucine (C) -2.5 -0.2 +0.1 +0.1 -0.2
nitrogen source nitrogen source nitrate 5mM -3.0 +0.3 -0.5 +0.4 +0.2
nitrogen source Urea (N) -2.9 +0.1 +0.0 +0.1 +0.0
nitrogen source L-Citrulline (N) -2.4 -0.6 +0.4 -0.0 -0.1
nitrogen source L-Phenylalanine (N) -2.4 -0.3 +0.3 +0.1 -0.1
motility inner cut, LB soft agar motility assay -2.3 +0.1 -0.5 +0.4 +0.1
carbon source D-Trehalose (C) -2.4 -0.1 +0.5 +0.1 -0.1
motility inner cut, LB soft agar motility assay -2.4 +0.4 +0.2 +0.1 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -2.0 +0.1 +0.8 -0.2 -0.0
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