Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_3868 and Pf6N2E2_3869 are separated by 212 nucleotidesPf6N2E2_3869 and Pf6N2E2_3870 overlap by 4 nucleotidesPf6N2E2_3870 and Pf6N2E2_3871 are separated by 13 nucleotidesPf6N2E2_3871 and Pf6N2E2_3872 are separated by 59 nucleotides Pf6N2E2_3868 - Transcriptional regulator, LysR family, at 4,500,030 to 4,500,929 _3868 Pf6N2E2_3869 - Branched-chain amino acid transport protein AzlC, at 4,501,142 to 4,501,855 _3869 Pf6N2E2_3870 - hypothetical protein, at 4,501,852 to 4,502,289 _3870 Pf6N2E2_3871 - FIG00553872: hypothetical protein, at 4,502,303 to 4,503,049 _3871 Pf6N2E2_3872 - hypothetical protein, at 4,503,109 to 4,503,243 _3872
Group Condition Pf6N2E2_3868 Pf6N2E2_3869 Pf6N2E2_3870 Pf6N2E2_3871 Pf6N2E2_3872
nitrogen source Gly-Glu (N) -2.9 -4.1 -0.7 -1.8 -0.6
carbon source Carnitine Hydrochloride (C) -3.0 -4.3 -0.4 -1.7 +0.1
carbon source Carnitine Hydrochloride (C) -2.8 -3.9 +0.0 -1.0 +0.1
carbon source D-Alanine (C) -1.1 -3.9 -0.5 -0.9 -0.1
nitrogen source Gly-Glu (N) -1.5 -3.0 -0.0 -1.8 -0.1
nitrogen source L-Lysine (N) -1.5 -3.0 -0.6 -0.7 -0.3
carbon source D-Alanine (C) -1.4 -3.6 -0.3 -0.8 +0.1
carbon source L-Leucine (C) -0.2 -4.3 -0.7 +0.2 -0.5
stress RCH2 defined with Cobalt chloride 0.04 mM -2.3 -2.2 +0.6 -1.0 -0.5
carbon source Ying_OrganicAcid7 rep A; time point 3 -1.1 -1.4 -0.3 -0.9 -1.1
stress RCH2 defined with Cobalt chloride 0.04 mM -1.8 -2.4 +0.5 -1.4 +0.5
carbon source L-Leucine (C) -0.0 -3.3 -0.8 -0.2 -0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.0 -1.4 +0.0 -0.8 -1.2
carbon source L-Isoleucine (C) -0.1 -3.7 -0.1 +0.1 -0.5
carbon source L-Leucine (C) -0.1 -2.2 -1.7 -0.3 +0.2
resistance 20 mM putrescine -1.0 -2.7 +0.5 +0.0 -0.7
nitrogen source nitrogen source nitrate 5mM +0.2 -1.1 -2.6 +0.3 -0.5
carbon source L-Leucine (C) -0.0 -4.2 +1.1 +0.1 -0.1
nitrogen source Cytosine (N) +1.0 -2.8 -0.0 +1.5 -1.0
nitrogen source nitrogen source nitrite 5mM +0.7 -0.7 -0.6 +0.9 -1.4
nitrogen source Uridine (N) +1.3 -1.2 +0.1 +1.5 -0.5
vitamin No vitamins t2 +1.1 -1.6 +0.2 +0.6 +1.0
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +1.2 -1.7 +0.7 +1.9 -0.1
motility inner cut, LB soft agar motility assay +1.9 -0.8 -0.1 +2.5 +0.0
motility outer cut, LB soft agar motility assay +1.8 -0.6 +0.4 +2.2 +0.2
carbon source D-Galactose (C) +0.2 +3.2 +0.9 -0.4 +0.3
motility inner cut, LB soft agar motility assay +2.1 -0.4 +0.5 +2.2 +0.3
motility inner cut, LB soft agar motility assay +1.9 -0.7 +1.0 +2.2 +0.2
carbon source D-Fructose (C) +0.8 +3.1 +0.5 +0.5 +0.1
motility outer cut, LB soft agar motility assay +2.6 -0.6 +1.1 +2.4 +0.6
remove
Pf6N2E2_3868
plot		 remove
Pf6N2E2_3869
plot		 remove
Pf6N2E2_3870		 remove
Pf6N2E2_3871
plot		 remove
Pf6N2E2_3872
plot