Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3772 and Pf6N2E2_3773 are separated by 84 nucleotidesPf6N2E2_3773 and Pf6N2E2_3774 are separated by 112 nucleotidesPf6N2E2_3774 and Pf6N2E2_3775 are separated by 61 nucleotidesPf6N2E2_3775 and Pf6N2E2_3776 are separated by 162 nucleotides Pf6N2E2_3772 - Polyhydroxyalkanoic acid synthase, at 4,395,144 to 4,396,823 _3772 Pf6N2E2_3773 - Poly(3-hydroxyalkanoate) depolymerase, at 4,396,908 to 4,397,762 _3773 Pf6N2E2_3774 - Polyhydroxyalkanoic acid synthase, at 4,397,875 to 4,399,557 _3774 Pf6N2E2_3775 - Transcriptional regulator PhaD, at 4,399,619 to 4,400,239 _3775 Pf6N2E2_3776 - Polyhydroxyalkanoate granule-associated protein PhaF, at 4,400,402 to 4,401,283 _3776
Group Condition Pf6N2E2_3772 Pf6N2E2_3773 Pf6N2E2_3774 Pf6N2E2_3775 Pf6N2E2_3776
nitrogen source nitrogen source nitrite 1mM -0.7 -0.0 -0.3 -0.5 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.5 -0.1 +0.0 -0.3 N.D.
nitrogen source L-Proline (N) -0.1 -0.3 +0.0 -0.4 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 -0.4 -0.2 +0.1 -0.3 N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 -0.4 +0.2 +0.0 -0.7 N.D.
carbon source D-Glucose (C) -0.6 -0.1 -0.3 +0.2 N.D.
carbon source D-Glucose (C) -0.5 -0.1 -0.2 +0.3 N.D.
stress dimethyl sulfone 0.25 M +0.2 +0.2 -0.1 -0.7 N.D.
stress Bile salts 0.0125 M -0.2 +0.4 -0.6 +0.1 N.D.
stress Hydroxylamine 0.5 M +0.0 -0.3 +0.3 -0.4 N.D.
nitrogen source Cytosine (N) +0.2 -0.1 +0.2 -0.5 N.D.
stress copper (II) chloride 3 mM +0.1 -0.2 +0.4 -0.3 N.D.
stress deoxycholate 0.0125 M +0.1 -0.5 -0.1 +0.4 N.D.
stress Zinc chloride 0.0000015625 M +0.1 -0.4 +0.5 -0.2 N.D.
carbon source Ying_Others16 rep A; time point 3 -0.0 +0.3 -0.4 +0.3 N.D.
carbon source Ying_Others16 rep C; time point 3 +0.1 -0.3 -0.1 +0.6 N.D.
nitrogen source nitrogen source nitrate 5mM -0.3 -0.1 +0.1 +0.6 N.D.
carbon source Carbon source Sucrose 2.5 mM -0.2 +0.3 -0.2 +0.5 N.D.
carbon source Carbon source Sucrose 10 mM -0.1 +0.3 -0.2 +0.5 N.D.
stress Nickel (II) chloride 1 mM +0.2 +0.3 -0.1 +0.4 N.D.
carbon source L-Lactate (C) +0.2 +0.2 +0.2 +0.2 N.D.
carbon source octanoate (C) +0.0 +0.4 +0.4 +0.1 N.D.
stress Phosphomycin 0.004 mg/ml +0.1 +0.1 +0.3 +0.4 N.D.
carbon source pyruvate (C) +0.1 +0.2 +0.2 +0.5 N.D.
carbon source D-Lactate (C) +0.3 +0.1 +0.2 +0.4 N.D.
carbon source D-Alanine (C) +0.2 +0.2 +0.3 +0.3 N.D.
lb LB no stress 48 hours +0.3 +0.5 +0.2 +0.1 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM +0.4 +0.4 +0.3 -0.0 N.D.
carbon source octanoate (C) +0.2 +0.7 +0.0 +0.3 N.D.
carbon source L-Lactate (C) +0.4 +0.3 +0.4 +0.5 N.D.
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