Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3759 and Pf6N2E2_3760 overlap by 1 nucleotidesPf6N2E2_3760 and Pf6N2E2_3761 are separated by 313 nucleotidesPf6N2E2_3761 and Pf6N2E2_3762 are separated by 302 nucleotidesPf6N2E2_3762 and Pf6N2E2_3763 overlap by 36 nucleotides Pf6N2E2_3759 - Type IV pilus biogenesis protein PilN, at 4,379,887 to 4,380,453 _3759 Pf6N2E2_3760 - Type IV pilus biogenesis protein PilM, at 4,380,453 to 4,381,517 _3760 Pf6N2E2_3761 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 4,381,831 to 4,384,170 _3761 Pf6N2E2_3762 - NADP-dependent malic enzyme (EC 1.1.1.40), at 4,384,473 to 4,385,741 _3762 Pf6N2E2_3763 - hypothetical protein, at 4,385,706 to 4,385,819 _3763
Group Condition Pf6N2E2_3759 Pf6N2E2_3760 Pf6N2E2_3761 Pf6N2E2_3762 Pf6N2E2_3763
carbon source a-Ketoglutaric (C) +0.1 -0.0 -0.7 -4.1 -5.4
nitrogen source L-Glutamic (N) +0.3 +0.2 +0.2 -4.1 -5.2
nitrogen source L-Glutamic (N) +0.0 +0.1 +0.3 -3.9 -4.3
nitrogen source L-Glutamine (N) +0.4 +0.2 -0.2 -3.9 -3.7
carbon source L-Glutamine (C) +0.4 -0.1 -0.9 -4.9 -1.5
nitrogen source L-Glutamine (N) +0.1 +0.1 -0.4 -4.3 -2.2
carbon source a-Ketoglutaric (C) +0.2 +0.0 -0.6 -3.2 -2.3
carbon source L-Glutamine (C) -0.1 +0.0 -0.7 -4.7 -0.4
carbon source D-Alanine (C) +0.2 +0.4 -3.6 -0.8 -1.8
nitrogen source L-Aspartic Acid (N) +0.1 +0.1 -0.2 -2.6 -3.0
carbon source L-Asparagine (C) -0.2 +0.1 -0.6 -1.6 -3.0
stress RCH2 defined with Cobalt chloride 0.04 mM +0.0 -0.1 -1.9 -1.0 -2.0
nitrogen source L-Aspartic Acid (N) +0.1 -0.1 -0.1 -3.1 -1.8
carbon source 4-Hydroxybenzoic Acid (C) +0.0 +0.2 +0.4 -3.9 -1.6
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.3 +0.4 -3.5 -1.8
carbon source succinate (C) +0.2 -0.1 -0.5 -2.8 -1.6
motility inner cut, LB soft agar motility assay +0.3 +0.4 -2.9 -1.1 -1.4
stress RCH2 defined with Cobalt chloride 0.04 mM -0.5 +0.1 -1.3 -0.9 -2.0
carbon source L-Histidine (C) +0.3 +0.2 -0.6 -3.1 -1.2
carbon source octanoate (C) -0.1 +0.0 -1.1 -3.6 +0.4
carbon source L-Histidine (C) +0.1 +0.3 -0.6 -2.8 -1.0
carbon source octanoate (C) +0.3 -0.0 -1.2 -3.2 +0.3
motility inner cut, LB soft agar motility assay +0.2 +0.2 -3.2 -0.8 +0.5
stress Magnesium chloride 0.125 M -0.2 +0.1 -2.8 -0.4 +1.1
nitrogen source L-Serine (N) +0.4 -0.0 +0.7 -1.1 -2.2
carbon source D-Trehalose (C) +0.3 +0.3 +0.9 -0.2 -3.1
carbon source L-Leucine (C) +0.1 +0.3 +0.9 -1.0 -2.2
carbon source L-Leucine (C) -0.2 +0.5 +1.3 -2.1 -0.8
stress Bile salts 0.0125 M -0.8 +0.3 +1.6 -0.3 -2.2
carbon source L-Leucine (C) +0.2 +0.4 +1.2 -2.6 -0.3
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