Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3693 and Pf6N2E2_3694 are separated by 286 nucleotidesPf6N2E2_3694 and Pf6N2E2_3695 are separated by 286 nucleotidesPf6N2E2_3695 and Pf6N2E2_3696 are separated by 159 nucleotidesPf6N2E2_3696 and Pf6N2E2_3697 are separated by 133 nucleotides Pf6N2E2_3693 - Helix-turn-helix motif, at 4,310,889 to 4,311,026 _3693 Pf6N2E2_3694 - Helix-turn-helix motif, at 4,311,313 to 4,311,450 _3694 Pf6N2E2_3695 - Helix-turn-helix motif, at 4,311,737 to 4,312,138 _3695 Pf6N2E2_3696 - hypothetical protein, at 4,312,298 to 4,312,576 _3696 Pf6N2E2_3697 - Transcriptional regulator, LysR family, at 4,312,710 to 4,313,576 _3697
Group Condition Pf6N2E2_3693 Pf6N2E2_3694 Pf6N2E2_3695 Pf6N2E2_3696 Pf6N2E2_3697
nitrogen source nitrogen source nitrate 20mM N.D. N.D. -0.7 -4.3 +0.0
nitrogen source nitrogen source nitrate 5mM N.D. N.D. -0.6 -4.4 +0.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM N.D. N.D. -1.0 -3.3 -0.3
lb LB no stress 48 hours N.D. N.D. -0.0 -4.2 -0.3
nitrogen source nitrogen source nitrite 5mM N.D. N.D. -0.2 -4.5 +0.2
nitrogen source nitrogen source nitrate 20mM N.D. N.D. +0.0 -4.4 +0.2
nitrogen source L-Asparagine (N) N.D. N.D. -0.5 -2.6 -0.3
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. N.D. -0.0 -3.3 -0.2
carbon source Carbon source Sucrose 10 mM N.D. N.D. -0.2 -3.0 -0.0
stress Nickel (II) chloride 1.5 mM N.D. N.D. -0.1 -2.8 -0.3
nitrogen source Gly-Glu (N) N.D. N.D. -0.1 -2.8 +0.1
stress deoxycholate 0.0125 M N.D. N.D. +0.3 -3.0 +0.1
vitamin No vitamins t1 N.D. N.D. -0.1 -1.4 -0.6
carbon source L-Leucine (C) N.D. N.D. -0.3 -1.6 -0.1
vitamin With vitamins t2 N.D. N.D. +0.4 -2.4 -0.0
stress Spectinomycin 0.01 mg/ml N.D. N.D. +0.1 -2.0 +0.0
carbon source RCH2_defined N.D. N.D. +0.3 -2.1 -0.1
carbon source casaminos (C) N.D. N.D. +0.2 -1.7 -0.2
nitrogen source nitrogen source nitrite 0.5mM N.D. N.D. -1.1 -0.8 +0.3
stress Nickel (II) chloride 1.5 mM N.D. N.D. +0.2 -1.6 -0.3
stress dimethyl sulfone 0.25 M N.D. N.D. -0.1 -1.8 +0.2
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. N.D. +0.2 -2.0 +0.3
stress Ceftazidime 0.15 mg/ml N.D. N.D. +0.5 -1.9 +0.2
stress molybdate 0.25 M N.D. N.D. +0.3 -1.7 +0.2
carbon source RCH2_defined N.D. N.D. +0.6 -1.3 -0.2
stress Nickel (II) chloride 1 mM N.D. N.D. -0.8 +1.7 -0.1
carbon source Ying_all64 rep A; time point 3 N.D. N.D. -0.3 +1.9 -0.3
carbon source Ying_Others16 rep C; time point 3 N.D. N.D. -0.0 +1.7 -0.3
stress Nalidixic 0.008 mg/ml N.D. N.D. +0.6 +1.3 +0.3
stress Zinc chloride 0.0000015625 M N.D. N.D. +0.6 +1.8 +0.2
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