Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_3677 and Pf6N2E2_3678 are separated by 84 nucleotidesPf6N2E2_3678 and Pf6N2E2_3679 are separated by 137 nucleotidesPf6N2E2_3679 and Pf6N2E2_3680 are separated by 81 nucleotidesPf6N2E2_3680 and Pf6N2E2_3681 are separated by 41 nucleotides Pf6N2E2_3677 - Sensory box/GGDEF family protein, at 4,284,139 to 4,286,832 _3677 Pf6N2E2_3678 - Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11), at 4,286,917 to 4,287,564 _3678 Pf6N2E2_3679 - Protein involved in catabolism of external DNA, at 4,287,702 to 4,288,541 _3679 Pf6N2E2_3680 - hypothetical protein, at 4,288,623 to 4,289,309 _3680 Pf6N2E2_3681 - VgrG protein, at 4,289,351 to 4,291,405 _3681
Group Condition Pf6N2E2_3677 Pf6N2E2_3678 Pf6N2E2_3679 Pf6N2E2_3680 Pf6N2E2_3681
motility inner cut, LB soft agar motility assay -4.2 -0.0 -1.0 +0.2 +0.1
motility inner cut, LB soft agar motility assay -3.9 -0.1 -0.0 -0.2 -0.3
motility inner cut, LB soft agar motility assay -4.8 +0.0 +0.4 -0.1 +0.0
motility outer cut, LB soft agar motility assay -3.3 +0.3 +0.1 -0.0 -0.1
nitrogen source Cytidine (N) -3.3 +0.3 -0.1 +0.1 +0.1
motility outer cut, LB soft agar motility assay -3.1 +0.3 +0.1 +0.3 +0.1
nitrogen source Glucuronamide (N) -2.2 -0.0 +0.4 -0.2 -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 +0.0 -1.2 -0.9 +0.0
carbon source Ying_Others16 rep A; time point 1 -0.1 -0.1 -0.8 -1.1 -0.0
nitrogen source L-Serine (N) -2.6 +0.0 +0.4 +0.4 -0.1
nitrogen source Uridine (N) -1.7 -0.1 +0.1 -0.1 -0.1
nitrogen source Cytidine (N) -2.2 +0.1 -0.1 +0.3 +0.1
nitrogen source L-Serine (N) -2.0 +0.1 +0.0 +0.2 -0.2
nitrogen source nitrogen source nitrite 0.5mM -0.4 +0.1 -1.5 +0.2 +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 +0.0 +0.3 -0.8 -0.9 +0.0
nitrogen source nitrogen source nitrite 1mM -0.2 +0.2 -1.5 +0.1 +0.2
nitrogen source L-Lysine (N) -1.3 -0.1 +0.4 +0.0 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.2 +0.3 -0.4 -0.8 +0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.3 +0.3 -0.8 -0.5 -0.1
stress RCH2 defined with copper (II) chloride 0.03 mM -1.4 +0.0 +0.5 +0.1 +0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -1.1 -0.2 +0.3 +0.2 +0.1
stress RCH2 defined with copper (II) chloride 0.03 mM -1.3 +0.1 +0.3 +0.2 +0.1
nitrogen source L-Isoleucine (N) -1.3 +0.4 +0.4 -0.1 +0.0
nitrogen source L-Isoleucine (N) -1.3 +0.1 +0.6 +0.0 +0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -1.3 +0.0 +0.8 +0.1 +0.1
carbon source RCH2_defined -1.0 +0.3 +0.3 +0.2 +0.1
stress Doxycycline hyclate 0.0001 mg/ml -1.1 +0.1 +0.7 +0.3 -0.0
denitrifying Nitrate reduction, replicate C +1.5 -0.2 -0.4 -0.1 +0.0
vitamin With vitamins t2 +0.7 +0.5 +0.2 -0.4 +0.2
vitamin No vitamins t2 +0.9 +0.5 +0.3 -0.1 +0.2
remove
Pf6N2E2_3677
plot		 remove
Pf6N2E2_3678
plot		 remove
Pf6N2E2_3679		 remove
Pf6N2E2_3680
plot		 remove
Pf6N2E2_3681
plot