Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3673 and Pf6N2E2_3674 overlap by 6 nucleotidesPf6N2E2_3674 and Pf6N2E2_3675 are separated by 11 nucleotidesPf6N2E2_3675 and Pf6N2E2_3676 are separated by 396 nucleotidesPf6N2E2_3676 and Pf6N2E2_3677 are separated by 182 nucleotides Pf6N2E2_3673 - hypothetical protein, at 4,277,760 to 4,277,879 _3673 Pf6N2E2_3674 - Pyruvate dehydrogenase E1 component (EC 1.2.4.1), at 4,277,874 to 4,280,519 _3674 Pf6N2E2_3675 - Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12), at 4,280,531 to 4,282,168 _3675 Pf6N2E2_3676 - Phosphodiesterase/alkaline phosphatase D-like, at 4,282,565 to 4,283,956 _3676 Pf6N2E2_3677 - Sensory box/GGDEF family protein, at 4,284,139 to 4,286,832 _3677
Group Condition Pf6N2E2_3673 Pf6N2E2_3674 Pf6N2E2_3675 Pf6N2E2_3676 Pf6N2E2_3677
motility inner cut, LB soft agar motility assay N.D. N.D. N.D. +0.3 -4.8
motility inner cut, LB soft agar motility assay N.D. N.D. N.D. +0.4 -4.2
motility inner cut, LB soft agar motility assay N.D. N.D. N.D. +0.4 -3.9
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. +0.2 -3.3
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. +0.1 -3.1
nitrogen source Cytidine (N) N.D. N.D. N.D. +0.4 -3.3
nitrogen source L-Serine (N) N.D. N.D. N.D. -0.2 -2.6
nitrogen source Glucuronamide (N) N.D. N.D. N.D. +0.3 -2.2
nitrogen source L-Serine (N) N.D. N.D. N.D. +0.1 -2.0
nitrogen source Cytidine (N) N.D. N.D. N.D. +0.5 -2.2
nitrogen source Uridine (N) N.D. N.D. N.D. +0.1 -1.7
carbon source L-Leucine (C) N.D. N.D. N.D. +0.2 -1.5
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. N.D. N.D. +0.1 -1.4
nitrogen source L-Alanine (N) N.D. N.D. N.D. +0.0 -1.2
nitrogen source L-Lysine (N) N.D. N.D. N.D. +0.1 -1.3
carbon source D-Glucose (C) N.D. N.D. N.D. +0.1 -1.2
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. N.D. N.D. +0.2 -1.3
carbon source L-Leucine (C) N.D. N.D. N.D. +0.0 -1.2
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. N.D. N.D. +0.2 -1.3
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. N.D. N.D. +0.1 -1.1
nitrogen source Parabanic Acid (N) N.D. N.D. N.D. +0.1 -1.0
nitrogen source L-Isoleucine (N) N.D. N.D. N.D. +0.4 -1.3
nitrogen source L-Isoleucine (N) N.D. N.D. N.D. +0.6 -1.3
stress Doxycycline hyclate 0.0001 mg/ml N.D. N.D. N.D. +0.4 -1.1
carbon source L-Alanine (C) N.D. N.D. N.D. +0.4 -0.9
stress Cobalt chloride 0.6 mM N.D. N.D. N.D. +0.7 -0.6
stress Cobalt chloride 0.6 mM N.D. N.D. N.D. +1.0 -0.8
stress Cobalt chloride 0.6 mM N.D. N.D. N.D. +1.3 -0.8
stress Cobalt chloride 0.6 mM N.D. N.D. N.D. +1.0 -0.5
denitrifying Nitrate reduction, replicate C N.D. N.D. N.D. -0.0 +1.5
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