Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3646 and Pf6N2E2_3647 are separated by 46 nucleotidesPf6N2E2_3647 and Pf6N2E2_3648 are separated by 103 nucleotidesPf6N2E2_3648 and Pf6N2E2_3649 are separated by 11 nucleotidesPf6N2E2_3649 and Pf6N2E2_3650 are separated by 60 nucleotides Pf6N2E2_3646 - 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-), at 4,247,468 to 4,248,718 _3646 Pf6N2E2_3647 - LysR family transcriptional regulator PA4989, at 4,248,765 to 4,249,655 _3647 Pf6N2E2_3648 - Ethidium bromide-methyl viologen resistance protein EmrE, at 4,249,759 to 4,250,091 _3648 Pf6N2E2_3649 - hypothetical protein, at 4,250,103 to 4,250,252 _3649 Pf6N2E2_3650 - Oxidoreductase, FAD-binding, at 4,250,313 to 4,251,488 _3650
Group Condition Pf6N2E2_3646 Pf6N2E2_3647 Pf6N2E2_3648 Pf6N2E2_3649 Pf6N2E2_3650
stress Benzalkonium Chloride 0.016 mg/ml N.D. -2.4 -2.8 N.D. N.D.
stress Choline Lysine 20 mM N.D. -0.3 -1.9 N.D. N.D.
stress Hydroxylamine 0.5 M N.D. -0.4 -0.6 N.D. N.D.
stress Nickel (II) chloride 0.0025 M N.D. -0.3 -0.6 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. -0.2 -0.6 N.D. N.D.
stress Hydroxide 0.05 M N.D. -0.4 -0.4 N.D. N.D.
stress phosphite 0.25 M N.D. -0.2 -0.6 N.D. N.D.
stress Vanillyl Alcohol 0.005 M N.D. -0.1 -0.6 N.D. N.D.
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. -0.6 -0.1 N.D. N.D.
stress Benzethonium chloride 0.02 mM N.D. +0.7 -0.9 N.D. N.D.
stress Tetracycline 0.0004 mg/ml N.D. +0.3 -0.4 N.D. N.D.
stress Rifampicin 0.003 mg/ml N.D. -0.4 +0.6 N.D. N.D.
stress Fusidic 0.4 mg/ml N.D. +0.5 -0.2 N.D. N.D.
stress Zinc chloride 0.0000015625 M N.D. +0.6 -0.2 N.D. N.D.
carbon source Ying_Others16 rep A; time point 1 N.D. +1.0 -0.5 N.D. N.D.
stress Bile salts 0.0125 M N.D. -0.1 +0.7 N.D. N.D.
carbon source Ying_sugar7 rep B; time point 2 N.D. +0.8 +0.0 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.2 +0.6 N.D. N.D.
lb LB no stress 48 hours N.D. +0.6 +0.3 N.D. N.D.
carbon source Ying_all64 rep C; time point 3 N.D. +0.9 +0.0 N.D. N.D.
carbon source Ying_all64 rep A; time point 3 N.D. +1.1 -0.1 N.D. N.D.
carbon source Ying_all64 rep B; time point 3 N.D. +1.1 +0.1 N.D. N.D.
carbon source Ying_Others16 rep C; time point 2 N.D. +1.5 -0.2 N.D. N.D.
carbon source Ying_Others16 rep C; time point 1 N.D. +1.3 -0.0 N.D. N.D.
carbon source Ying_sugar7 rep C; time point 2 N.D. +0.7 +0.6 N.D. N.D.
carbon source Ying_Others16 rep B; time point 2 N.D. +1.6 -0.2 N.D. N.D.
carbon source Ying_Others16 rep A; time point 2 N.D. +1.3 +0.2 N.D. N.D.
carbon source Ying_Others16 rep A; time point 3 N.D. +1.5 -0.0 N.D. N.D.
carbon source Ying_Others16 rep C; time point 3 N.D. +1.6 -0.1 N.D. N.D.
carbon source Ying_Others16 rep B; time point 3 N.D. +1.5 +0.3 N.D. N.D.
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