Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3482 and Pf6N2E2_3483 are separated by 174 nucleotidesPf6N2E2_3483 and Pf6N2E2_3484 are separated by 1 nucleotidesPf6N2E2_3484 and Pf6N2E2_3485 are separated by 95 nucleotidesPf6N2E2_3485 and Pf6N2E2_3486 are separated by 148 nucleotides Pf6N2E2_3482 - Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase, at 4,063,691 to 4,064,740 _3482 Pf6N2E2_3483 - FIG00956405: hypothetical protein, at 4,064,915 to 4,065,085 _3483 Pf6N2E2_3484 - Multidrug resistance transporter, Bcr/CflA family, at 4,065,087 to 4,066,289 _3484 Pf6N2E2_3485 - Copper chaperone, at 4,066,385 to 4,066,582 _3485 Pf6N2E2_3486 - FIG00953575: hypothetical protein, at 4,066,731 to 4,067,114 _3486
Group Condition Pf6N2E2_3482 Pf6N2E2_3483 Pf6N2E2_3484 Pf6N2E2_3485 Pf6N2E2_3486
stress Fusidic 0.4 mg/ml -0.1 N.D. -3.3 N.D. -0.4
stress Fusidic 0.3 mg/ml -0.0 N.D. -3.5 N.D. -0.1
motility inner cut, LB soft agar motility assay -0.1 N.D. -0.1 N.D. -2.0
motility inner cut, LB soft agar motility assay +0.1 N.D. +0.0 N.D. -2.4
motility outer cut, LB soft agar motility assay -0.2 N.D. +0.0 N.D. -1.8
carbon source Ying_AminoAcid20 rep A; time point 2 -0.2 N.D. -0.3 N.D. -1.2
carbon source Ying_Others16 rep A; time point 2 -0.5 N.D. -0.3 N.D. -0.6
stress Tetracycline 0.0004 mg/ml -0.2 N.D. -1.1 N.D. +0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.5 N.D. -0.0 N.D. -0.8
motility inner cut, LB soft agar motility assay -0.0 N.D. +0.1 N.D. -1.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.7 N.D. +0.1 N.D. -0.4
carbon source Ying_all64 rep A; time point 3 -0.4 N.D. -0.0 N.D. -0.6
carbon source Ying_AminoAcid20 rep C; time point 2 -0.5 N.D. -0.3 N.D. -0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.6 N.D. -0.1 N.D. -0.3
carbon source Ying_Others16 rep A; time point 1 -0.5 N.D. -0.2 N.D. -0.2
stress RCH2 defined with copper (II) chloride 0.03 mM -0.3 N.D. -0.9 N.D. +0.4
carbon source Ying_Nucleobase14 rep A; time point 2 -0.4 N.D. -0.4 N.D. +0.1
stress 4-Hydroxyacetophenone 0.00025 M -0.6 N.D. +0.1 N.D. -0.2
lb LB no stress 48 hours -0.8 N.D. +0.1 N.D. +0.1
motility outer cut, LB soft agar motility assay -0.2 N.D. +0.3 N.D. -0.6
stress Chloride 600 mM +0.3 N.D. -0.2 N.D. -0.5
carbon source Ying_sugar7 rep C; time point 1 -0.4 N.D. -0.2 N.D. +0.3
stress DEANONOate 0.000625 M +0.4 N.D. +0.1 N.D. -0.5
carbon source Ying_AminoAcid20 rep A; time point 3 -0.4 N.D. -0.0 N.D. +0.6
stress DEANONOate 0.000625 M +0.4 N.D. -0.4 N.D. +0.1
stress Chlorite 0.00005 M -0.3 N.D. +0.5 N.D. +0.2
carbon source Ying_sugar7 rep B; time point 2 -0.2 N.D. -0.1 N.D. +0.9
carbon source Ying_sugar7 rep C; time point 2 -0.1 N.D. +0.1 N.D. +0.6
vitamin No vitamins t2 +0.2 N.D. +0.2 N.D. +0.4
stress Cobalt chloride 0.6 mM +0.1 N.D. +0.6 N.D. +0.5
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