Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_3404 and Pf6N2E2_3405 overlap by 4 nucleotidesPf6N2E2_3405 and Pf6N2E2_3406 overlap by 1 nucleotidesPf6N2E2_3406 and Pf6N2E2_3407 are separated by 79 nucleotidesPf6N2E2_3407 and Pf6N2E2_3408 are separated by 98 nucleotides Pf6N2E2_3404 - Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps, at 3,949,017 to 3,949,700 _3404 Pf6N2E2_3405 - FIG00984945: hypothetical protein, at 3,949,697 to 3,950,353 _3405 Pf6N2E2_3406 - putative ABC transporter ATP-binding protein, at 3,950,353 to 3,951,141 _3406 Pf6N2E2_3407 - putative solute-binding component of ABC transporter, at 3,951,221 to 3,952,090 _3407 Pf6N2E2_3408 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 3,952,189 to 3,953,277 _3408
Group Condition Pf6N2E2_3404 Pf6N2E2_3405 Pf6N2E2_3406 Pf6N2E2_3407 Pf6N2E2_3408
motility outer cut, LB soft agar motility assay -0.2 -0.0 -1.8 -0.2 -0.4
nitrogen source nitrogen source nitrite 0.5mM -0.3 -0.1 -1.8 -0.3 +0.1
stress Bile salts 0.0125 M -0.4 -0.3 -0.8 -0.4 -0.1
stress Cobalt chloride 0.4 mM -0.3 -0.1 -1.1 +0.1 -0.2
carbon source Carbon source D,L-Lactate 10 mM -0.2 +0.1 -1.2 -0.2 -0.0
stress RCH2 defined with Cobalt chloride 0.04 mM -0.3 -0.2 -0.5 -0.6 +0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -0.4 -0.2 -0.3 -0.7 +0.1
stress selenate 0.5 M +0.0 -0.1 -1.3 -0.0 -0.1
stress Magnesium chloride 0.125 M -0.2 -0.3 -0.7 -0.1 +0.1
carbon source Ying_Nucleobase14 rep C; time point 1 +0.0 -0.2 -0.6 +0.1 -0.5
motility inner cut, LB soft agar motility assay -0.4 +0.0 -0.7 -0.2 +0.1
stress Chlorite 0.00005 M +0.2 -0.0 -0.9 -0.2 -0.1
stress Chloride 600 mM -0.2 -0.1 -0.8 -0.2 +0.3
nitrogen source Parabanic Acid (N) -0.1 -0.0 -0.6 +0.2 -0.5
vitamin No vitamins t1 -0.3 +0.0 -0.9 +0.1 +0.2
stress Nickel (II) chloride 0.0025 M -0.2 -0.1 -0.8 +0.2 +0.1
carbon source Ying_all64 rep A; time point 3 +0.3 -0.0 -0.8 +0.1 -0.2
nitrogen source Gly-Glu (N) -0.1 +0.1 -0.8 +0.3 +0.1
nitrogen source L-Serine (N) +0.2 -0.1 +0.2 +0.4 -1.1
nitrogen source nitrogen source nitrite 1mM -0.5 +0.1 +0.5 -0.3 -0.0
carbon source Carbon source D-Glucose 10 mM -0.3 +0.3 +0.3 -0.5 +0.0
carbon source Ying_Nucleobase14 rep B; time point 1 +0.2 -0.4 +0.5 +0.2 -0.3
stress Rifampicin 0.003 mg/ml +0.6 -0.0 +0.4 -0.4 -0.4
stress bromate 0.05 M +0.1 +0.1 -0.5 +0.0 +0.7
carbon source Ying_Others16 rep C; time point 1 -0.2 -0.1 +0.9 +0.0 -0.3
carbon source Ying_sugar7 rep C; time point 2 -0.2 -0.2 +0.8 +0.2 -0.0
carbon source D-Galactose (C) -0.1 +0.0 +1.2 -0.2 -0.4
stress periodate 0.00125 M -0.4 +0.3 +0.4 -0.0 +0.4
carbon source Ying_Others16 rep B; time point 3 +0.3 -0.4 +0.4 -0.1 +0.6
carbon source D-Xylose (C) +0.5 +0.2 +0.7 -0.0 +0.0
remove
Pf6N2E2_3404
plot		 remove
Pf6N2E2_3405
plot		 remove
Pf6N2E2_3406		 remove
Pf6N2E2_3407
plot		 remove
Pf6N2E2_3408
plot