Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_337 and Pf6N2E2_338 are separated by 147 nucleotidesPf6N2E2_338 and Pf6N2E2_339 are separated by 6 nucleotidesPf6N2E2_339 and Pf6N2E2_340 are separated by 1 nucleotidesPf6N2E2_340 and Pf6N2E2_341 are separated by 177 nucleotides Pf6N2E2_337 - hypothetical protein, at 404,587 to 404,859 _337 Pf6N2E2_338 - Transcriptional regulator, AraC family, at 405,007 to 405,510 _338 Pf6N2E2_339 - Glutathione-regulated potassium-efflux system protein KefC, at 405,517 to 407,343 _339 Pf6N2E2_340 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 407,345 to 407,866 _340 Pf6N2E2_341 - sensor histidine kinase, at 408,044 to 409,390 _341
Group Condition Pf6N2E2_337 Pf6N2E2_338 Pf6N2E2_339 Pf6N2E2_340 Pf6N2E2_341
stress Vanillyl Alcohol 0.005 M N.D. -2.0 -1.9 +0.2 -0.4
stress deoxycholate 0.0125 M N.D. -2.8 -0.8 -0.2 +0.1
stress nitrate 0.125 M N.D. -1.4 -0.9 -0.2 -0.2
nitrogen source nitrogen source nitrite 1mM N.D. -2.4 -0.3 +0.1 +0.0
stress Zinc chloride 0.0000015625 M N.D. -1.1 -1.4 +0.1 +0.0
stress RCH2 defined with Cobalt chloride 0.02 mM N.D. -2.5 -0.1 +0.1 +0.2
nitrogen source nitrogen source nitrite 1mM N.D. -2.5 -0.3 +0.3 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.0 -1.7 -0.5 -0.0
carbon source Ying_Others16 rep A; time point 1 N.D. +0.1 -1.5 -0.4 -0.3
nitrogen source nitrogen source nitrate 5mM N.D. -1.7 +0.0 +0.0 -0.5
lb LB N.D. -2.0 +0.2 -0.0 -0.3
stress bromate 0.05 M N.D. -0.0 -1.1 +0.2 -1.1
stress Nickel (II) chloride 0.0025 M N.D. -1.0 -1.4 +0.4 +0.1
stress pyrophosphate 0.0025 M N.D. -0.4 -1.5 +0.3 -0.3
motility inner cut, LB soft agar motility assay N.D. -0.2 -1.9 +0.1 +0.1
nitrogen source L-Arginine (N) N.D. -1.5 +0.5 -0.5 -0.1
motility inner cut, LB soft agar motility assay N.D. -2.1 +0.1 -0.4 +0.9
carbon source Trisodium citrate (C) N.D. +0.4 -1.1 -0.3 -0.4
motility outer cut, LB soft agar motility assay N.D. +0.0 -1.7 -0.3 +0.7
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. -2.3 +0.7 -0.1 +0.4
carbon source propionate (C) N.D. +0.5 -1.3 -0.1 -0.2
nitrogen source Glucuronamide (N) N.D. +1.0 +0.3 -0.3 -1.5
stress Chloride 600 mM N.D. -0.6 +1.0 -0.1 -0.8
stress RCH2 defined with Nickel (II) chloride 0.04 mM N.D. -1.0 +0.8 -0.4 +0.2
nitrogen source L-Serine (N) N.D. +0.3 +1.2 -0.4 -0.7
nitrogen source Urea (N) N.D. +0.3 +1.1 -0.2 -0.7
stress Nickel (II) chloride 1.5 mM N.D. +1.2 -0.5 -0.4 +0.4
stress Cobalt chloride 0.4 mM N.D. +0.7 +0.8 -0.3 +0.4
carbon source D-Trehalose (C) N.D. +1.2 +0.7 -0.3 +0.1
nitrogen source nitrogen source nitrite 5mM N.D. +1.0 -0.1 +0.5 +0.6
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