Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_321 and Pf6N2E2_322 are separated by 234 nucleotidesPf6N2E2_322 and Pf6N2E2_323 are separated by 166 nucleotidesPf6N2E2_323 and Pf6N2E2_324 overlap by 4 nucleotidesPf6N2E2_324 and Pf6N2E2_325 are separated by 44 nucleotides Pf6N2E2_321 - TRAP transporter solute receptor, unknown substrate 1, at 389,237 to 390,187 _321 Pf6N2E2_322 - Transcriptional regulator, LacI family, at 390,422 to 391,420 _322 Pf6N2E2_323 - Nucleoside-diphosphate-sugar epimerases, at 391,587 to 392,762 _323 Pf6N2E2_324 - Inosose isomerase (EC 5.3.99.-), at 392,759 to 393,850 _324 Pf6N2E2_325 - hypothetical protein, at 393,895 to 394,008 _325
Group Condition Pf6N2E2_321 Pf6N2E2_322 Pf6N2E2_323 Pf6N2E2_324 Pf6N2E2_325
motility outer cut, LB soft agar motility assay -0.2 -0.8 -0.5 -0.4 N.D.
stress phosphite 0.25 M -0.3 -0.8 -0.3 -0.2 N.D.
stress Cobalt chloride 0.6 mM -0.2 -1.0 -0.2 -0.1 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.3 -0.7 -0.1 -0.3 N.D.
carbon source Ying_Others16 rep A; time point 1 -0.3 -0.5 +0.1 -0.3 N.D.
carbon source Ying_Others16 rep A; time point 2 -0.2 -0.7 -0.1 +0.1 N.D.
carbon source Ying_Nucleobase14 rep A; time point 3 +0.2 -0.2 -0.3 -0.5 N.D.
stress nitrate 0.125 M -0.4 +0.2 -0.4 -0.3 N.D.
carbon source D-Glucosamine Hydrochloride (C) +0.3 -0.6 -0.3 +0.0 N.D.
stress Cobalt chloride 0.4 mM -0.0 -0.8 +0.2 +0.1 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 -0.5 -0.2 -0.1 +0.3 N.D.
stress Chloramphenicol 0.008 mg/ml +0.2 -0.3 -0.4 +0.1 N.D.
nitrogen source Gly-Glu (N) -0.3 -0.3 +0.6 -0.3 N.D.
carbon source Ying_sugar7 rep C; time point 2 +0.2 -0.5 +0.3 -0.1 N.D.
stress deoxycholate 0.0125 M +0.1 +0.4 -0.3 -0.3 N.D.
nitrogen source nitrogen source nitrate 20mM -0.2 +0.5 +0.1 -0.5 N.D.
nitrogen source nitrogen source nitrite 5mM -0.2 +0.6 -0.2 -0.1 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.0 +0.8 -0.4 -0.2 N.D.
stress Aluminum chloride 4 mM +0.3 -0.3 -0.1 +0.3 N.D.
stress arsenate 0.0005 M +0.0 +0.4 +0.2 -0.4 N.D.
stress Fluorophosphate 0.125 M +0.1 +0.4 -0.4 +0.2 N.D.
vitamin With vitamins t2 -0.2 +0.5 +0.4 -0.3 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.1 +0.6 +0.2 -0.2 N.D.
stress Gjerstad humics 0.5 M +0.1 +0.6 +0.2 -0.3 N.D.
vitamin No vitamins t1 -0.2 +0.5 +0.5 -0.1 N.D.
stress Cadmium chloride hemipentahydrate 0.00005 M -0.1 +0.4 +0.3 +0.4 N.D.
carbon source Carbon source Sucrose 10 mM +0.0 +0.3 +0.4 +0.4 N.D.
stress Zinc chloride 0.0000015625 M -0.1 +0.4 +0.5 +0.2 N.D.
lb LB no stress 48 hours -0.0 +0.7 +0.2 +0.2 N.D.
carbon source D-Galactose (C) +0.4 +0.5 +0.3 +0.2 N.D.
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