Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_319 and Pf6N2E2_320 overlap by 4 nucleotidesPf6N2E2_320 and Pf6N2E2_321 are separated by 81 nucleotidesPf6N2E2_321 and Pf6N2E2_322 are separated by 234 nucleotidesPf6N2E2_322 and Pf6N2E2_323 are separated by 166 nucleotides Pf6N2E2_319 - DUF1850 domain-containing protein, at 386,745 to 387,131 _319 Pf6N2E2_320 - TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1, at 387,128 to 389,155 _320 Pf6N2E2_321 - TRAP transporter solute receptor, unknown substrate 1, at 389,237 to 390,187 _321 Pf6N2E2_322 - Transcriptional regulator, LacI family, at 390,422 to 391,420 _322 Pf6N2E2_323 - Nucleoside-diphosphate-sugar epimerases, at 391,587 to 392,762 _323
Group Condition Pf6N2E2_319 Pf6N2E2_320 Pf6N2E2_321 Pf6N2E2_322 Pf6N2E2_323
stress Cobalt chloride 0.6 mM -1.0 -0.5 -0.2 -1.0 -0.2
stress phosphite 0.25 M -0.4 -0.3 -0.3 -0.8 -0.3
motility outer cut, LB soft agar motility assay -0.2 -0.1 -0.2 -0.8 -0.5
motility outer cut, LB soft agar motility assay -1.0 +0.1 -0.1 -0.0 -0.4
stress Cobalt chloride 0.6 mM -0.7 -0.3 +0.1 -0.4 +0.1
stress phosphite 0.25 M -1.1 -0.1 +0.2 -0.2 -0.0
lb LB no stress 48 hours -1.0 +0.1 -0.2 +0.3 -0.3
stress Cobalt chloride 0.4 mM -0.4 -0.1 -0.0 -0.8 +0.2
stress Cisplatin 0.008 mg/ml -1.0 +0.1 +0.1 -0.3 +0.1
stress Nickel (II) chloride 1.5 mM -1.1 -0.1 -0.1 -0.0 +0.3
stress Cobalt chloride 0.4 mM -0.6 -0.3 +0.0 -0.2 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.4 -0.2 -0.3 -0.7 -0.1
stress Cobalt chloride 0.6 mM -0.6 -0.0 +0.1 -0.5 +0.3
motility inner cut, LB soft agar motility assay -1.2 -0.1 +0.4 +0.2 -0.0
carbon source propionate (C) -0.9 -0.2 +0.1 +0.3 +0.2
nitrogen source L-Serine (N) -1.0 -0.0 -0.1 +0.7 +0.1
nitrogen source Gly-Glu (N) -0.3 +0.1 -0.3 -0.3 +0.6
nitrogen source Cytosine (N) -0.8 +0.2 +0.0 +0.2 +0.3
carbon source Carbon source D-Glucose 10 mM -0.6 +0.2 -0.1 +0.4 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.1 +0.0 +0.8 -0.4
stress tungstate 0.05 M -0.6 +0.0 -0.1 +0.6 +0.3
stress Nickel (II) chloride 0.0025 M -0.7 +0.1 +0.3 +0.5 -0.0
nitrogen source nitrogen source nitrite 1mM +0.9 -0.2 +0.0 -0.6 +0.1
nitrogen source nitrogen source nitrate 5mM +0.7 -0.3 +0.2 -0.0 +0.3
vitamin With vitamins t2 +0.3 -0.2 -0.2 +0.5 +0.4
stress Magnesium chloride 0.125 M +0.7 -0.0 -0.1 +0.5 +0.2
stress Bile salts 0.0125 M +0.6 +0.2 +0.6 -0.1 +0.1
stress deoxycholate 0.0125 M +0.4 +0.7 +0.1 +0.4 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM +0.8 +0.2 -0.1 +0.3 +0.1
nitrogen source nitrogen source nitrite 0.5mM +0.6 +0.1 -0.1 +0.6 +0.2
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