Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3138 and Pf6N2E2_3139 are separated by 147 nucleotidesPf6N2E2_3139 and Pf6N2E2_3140 are separated by 234 nucleotidesPf6N2E2_3140 and Pf6N2E2_3141 are separated by 184 nucleotidesPf6N2E2_3141 and Pf6N2E2_3142 are separated by 121 nucleotides Pf6N2E2_3138 - YaeQ protein, at 3,630,565 to 3,631,107 _3138 Pf6N2E2_3139 - L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16), at 3,631,255 to 3,632,454 _3139 Pf6N2E2_3140 - FIG00953680: hypothetical protein, at 3,632,689 to 3,632,976 _3140 Pf6N2E2_3141 - virulence sensor protein, at 3,633,161 to 3,634,531 _3141 Pf6N2E2_3142 - Threonine synthase (EC 4.2.3.1), at 3,634,653 to 3,636,062 _3142
Group Condition Pf6N2E2_3138 Pf6N2E2_3139 Pf6N2E2_3140 Pf6N2E2_3141 Pf6N2E2_3142
stress Hydroxylamine 0.5 M -1.5 -0.1 -0.6 +0.5 N.D.
stress RCH2 defined with copper (II) chloride 0.03 mM -1.8 +0.2 +0.3 -0.4 N.D.
stress RCH2 defined with Cobalt chloride 0.02 mM -1.5 -0.0 -0.1 +0.1 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM -1.1 -0.0 -0.3 -0.2 N.D.
stress DEANONOate 0.000625 M -1.0 +0.0 -0.4 -0.1 N.D.
carbon source Ying_Others16 rep A; time point 2 -0.9 -0.5 +0.0 -0.1 N.D.
nitrogen source L-Serine (N) -1.1 +0.3 -0.4 -0.1 N.D.
carbon source Ying_sugar7 rep C; time point 2 -0.9 +0.0 -0.4 +0.1 N.D.
nitrogen source L-Arginine (N) -0.6 -0.3 -0.5 +0.1 N.D.
carbon source RCH2_defined -1.3 +0.1 +0.3 -0.2 N.D.
stress RCH2 defined with Nickel (II) chloride 0.04 mM -1.2 +0.1 +0.5 -0.5 N.D.
stress RCH2 defined with Cobalt chloride 0.02 mM -0.8 -0.2 +0.2 -0.3 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM +0.4 -0.6 -0.7 -0.2 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 -0.5 -0.6 +0.3 -0.1 N.D.
nitrogen source nitrogen source nitrate 5mM -1.2 +0.4 -0.1 +0.1 N.D.
stress periodate 0.00125 M -1.0 -0.1 +0.4 +0.0 N.D.
carbon source Ying_Nucleobase14 rep C; time point 3 -1.1 -0.1 +0.4 +0.1 N.D.
carbon source Ying_Others16 rep B; time point 3 -1.1 +0.2 +0.2 +0.2 N.D.
carbon source Ying_all64 rep B; time point 3 -1.0 +0.3 +0.0 +0.2 N.D.
stress deoxycholate 0.0125 M +0.5 +0.8 -1.1 -0.3 N.D.
carbon source Ying_all64 rep A; time point 3 -0.9 +0.2 +0.4 +0.2 N.D.
stress Nickel (II) chloride 1.5 mM -0.6 -0.2 +0.7 +0.0 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -0.9 +0.2 +0.7 -0.0 N.D.
carbon source RCH2_defined -0.6 +0.2 +0.6 -0.2 N.D.
carbon source Ying_all64 rep C; time point 3 -0.8 -0.2 +0.7 +0.2 N.D.
carbon source Ying_Nucleobase14 rep A; time point 3 -0.7 +0.2 +0.4 +0.2 N.D.
stress phosphite 0.25 M +0.7 +0.3 -0.6 +0.1 N.D.
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.9 +0.1 -0.2 +0.3 N.D.
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +1.2 +0.1 -0.2 +0.1 N.D.
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +1.1 +0.2 +0.3 +0.3 N.D.
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