Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_3109 and Pf6N2E2_3110 are separated by 89 nucleotidesPf6N2E2_3110 and Pf6N2E2_3111 overlap by 4 nucleotidesPf6N2E2_3111 and Pf6N2E2_3112 are separated by 84 nucleotidesPf6N2E2_3112 and Pf6N2E2_3113 are separated by 36 nucleotides Pf6N2E2_3109 - Outer membrane lipoprotein omp16 precursor, at 3,597,941 to 3,598,732 _3109 Pf6N2E2_3110 - Putative lipoprotein in cluster with COG2110, at 3,598,822 to 3,599,151 _3110 Pf6N2E2_3111 - Hydrolase of the alpha/beta superfamily in cluster with COG2110, at 3,599,148 to 3,600,053 _3111 Pf6N2E2_3112 - FIG00953322: hypothetical protein, at 3,600,138 to 3,601,415 _3112 Pf6N2E2_3113 - Putative lipoprotein, specific for Pseudomonas, in cluster with COG2110, at 3,601,452 to 3,602,006 _3113
Group Condition Pf6N2E2_3109 Pf6N2E2_3110 Pf6N2E2_3111 Pf6N2E2_3112 Pf6N2E2_3113
carbon source octanoate (C) +0.0 +0.2 -0.4 -1.6 -0.4
carbon source octanoate (C) +0.0 +0.1 +0.1 -1.0 -0.8
carbon source Ying_Others16 rep C; time point 3 -0.3 -0.6 -0.1 -0.1 -0.4
carbon source Ying_all64 rep A; time point 3 -0.0 -0.4 -0.4 +0.2 -0.5
nitrogen source nitrogen source nitrite 1mM +0.5 +0.1 -0.7 -0.4 -0.5
carbon source Ying_all64 rep B; time point 3 -0.1 -0.3 -0.4 +0.2 -0.6
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 -0.5 +0.0 +0.1 -0.5
carbon source D-Mannose (C) +0.1 -0.2 -0.3 -0.0 -0.7
nitrogen source nitrogen source nitrate 20mM +0.4 -0.2 -0.7 -0.1 -0.4
nitrogen source nitrogen source nitrite 0.5mM +0.3 -0.2 -0.2 -0.3 -0.6
carbon source Ying_Others16 rep A; time point 3 -0.1 -0.1 -0.1 +0.3 -0.9
nitrogen source nitrogen source nitrite 0.5mM +0.5 +0.0 -0.4 -0.3 -0.6
nitrogen source nitrogen source nitrite 1mM +0.5 +0.0 -0.9 -0.0 -0.5
carbon source Ying_Others16 rep B; time point 3 -0.1 -0.4 -0.3 +0.3 -0.3
nitrogen source nitrogen source nitrite 5mM +0.7 -0.0 -0.4 -0.2 -0.6
stress Magnesium chloride 0.125 M +0.2 -0.4 -0.4 -0.1 +0.3
nitrogen source nitrogen source nitrite 5mM +0.8 +0.1 -0.4 -0.2 -0.7
motility inner cut, LB soft agar motility assay -0.1 -0.2 -0.6 +0.3 +0.1
nitrogen source nitrogen source nitrate 5mM +0.6 -0.0 -0.2 -0.1 -0.6
stress molybdate 0.25 M +0.4 -0.2 -0.4 +0.1 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM +0.6 +0.1 -0.5 +0.1 -0.6
nitrogen source nitrogen source Ammonium chloride 20mM +0.5 -0.2 -0.3 -0.1 -0.2
nitrogen source nitrogen source nitrate 5mM +0.5 +0.2 -0.6 -0.1 -0.1
motility outer cut, LB soft agar motility assay -0.0 -0.4 -0.3 +0.4 +0.2
stress Zinc chloride 0.0000015625 M +0.1 -0.4 +0.2 -0.3 +0.4
nitrogen source nitrogen source nitrate 20mM +0.6 -0.2 -0.4 -0.2 +0.1
stress deoxycholate 0.0125 M +0.1 -0.3 -0.6 +0.3 +0.6
stress RCH2 defined with Cobalt chloride 0.02 mM +0.2 +0.5 -0.3 -0.4 +0.1
stress molybdate 0.25 M +0.6 +0.2 -0.3 +0.0 -0.2
stress Hydroxylamine 0.5 M -0.1 +1.0 +0.0 -0.2 +0.2
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