Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2970 and Pf6N2E2_2971 are separated by 44 nucleotidesPf6N2E2_2971 and Pf6N2E2_2972 are separated by 129 nucleotidesPf6N2E2_2972 and Pf6N2E2_2973 are separated by 17 nucleotidesPf6N2E2_2973 and Pf6N2E2_2974 are separated by 214 nucleotides Pf6N2E2_2970 - methylated-DNA--protein-cysteine methyltransferase-related protein, at 3,460,452 to 3,460,805 _2970 Pf6N2E2_2971 - AmpG permease, at 3,460,850 to 3,462,409 _2971 Pf6N2E2_2972 - Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type, at 3,462,539 to 3,464,254 _2972 Pf6N2E2_2973 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 3,464,272 to 3,465,225 _2973 Pf6N2E2_2974 - DNA polymerase IV (EC 2.7.7.7), at 3,465,440 to 3,466,612 _2974
Group Condition Pf6N2E2_2970 Pf6N2E2_2971 Pf6N2E2_2972 Pf6N2E2_2973 Pf6N2E2_2974
stress Tetracycline 0.0004 mg/ml -0.7 -1.1 N.D. -2.4 -0.1
stress Doxycycline hyclate 0.0001 mg/ml -0.1 -0.1 N.D. -3.6 -0.2
stress pyrophosphate 0.0025 M -0.2 -0.1 N.D. -2.8 -0.0
stress Lomefloxacin 0.0002 mM -0.3 +0.2 N.D. -3.0 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.1 -2.1 N.D. -0.4 +0.1
lb LB no stress 48 hours -1.3 -0.2 N.D. -1.1 +0.0
stress Phosphomycin 0.004 mg/ml +0.5 -3.6 N.D. +0.6 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.2 -2.0 N.D. -0.4 +0.1
stress DEANONOate 0.000625 M -0.4 +0.8 N.D. -2.4 -0.4
nitrogen source L-Serine (N) -0.9 -1.3 N.D. -0.5 +0.4
stress Rifampicin 0.003 mg/ml -0.6 +0.6 N.D. -2.2 -0.2
stress DEANONOate 0.000625 M -0.2 +0.8 N.D. -2.7 -0.1
nitrogen source L-Serine (N) +0.3 -1.2 N.D. -1.1 -0.1
stress Zinc chloride 0.0000015625 M +0.7 -3.6 N.D. +0.6 +0.2
stress Cisplatin 0.008 mg/ml +0.2 +0.3 N.D. -1.7 -0.8
stress sodium iodate 0.005 M +0.3 +0.5 N.D. -2.7 -0.0
stress Nalidixic 0.008 mg/ml -0.2 +0.3 N.D. -2.3 +0.4
nitrogen source nitrogen source nitrite 0.5mM +0.5 -0.8 N.D. -1.4 +0.1
stress Nalidixic 0.004 mg/ml -0.3 +0.4 N.D. -2.0 +0.6
stress periodate 0.00125 M -0.1 +1.0 N.D. -1.7 -0.2
carbon source octanoate (C) +0.2 +1.1 N.D. -2.3 +0.0
motility outer cut, LB soft agar motility assay -0.7 -1.1 N.D. +1.0 +0.1
stress bromate 0.05 M +0.7 +0.6 N.D. -1.8 +0.0
motility inner cut, LB soft agar motility assay +0.6 -1.7 N.D. +1.1 +0.0
stress dimethyl sulfone 0.25 M -0.9 -0.4 N.D. +1.7 +0.0
stress dimethyl sulfone 0.25 M -1.0 -0.4 N.D. +2.3 +0.0
stress deoxycholate 0.0125 M +0.6 -1.1 N.D. +1.2 +0.5
motility inner cut, LB soft agar motility assay +0.2 -1.3 N.D. +2.1 +0.3
stress Choline Lysine 20 mM -0.3 +0.9 N.D. +2.2 +0.2
stress Vancomycin 0.24 mg/ml -0.1 +0.5 N.D. +5.4 +0.3
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