Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2926 and Pf6N2E2_2927 are separated by 277 nucleotidesPf6N2E2_2927 and Pf6N2E2_2928 are separated by 27 nucleotidesPf6N2E2_2928 and Pf6N2E2_2929 overlap by 4 nucleotidesPf6N2E2_2929 and Pf6N2E2_2930 overlap by 4 nucleotides Pf6N2E2_2926 - ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data), at 3,419,194 to 3,419,895 _2926 Pf6N2E2_2927 - Putative signal peptide protein, at 3,420,173 to 3,420,478 _2927 Pf6N2E2_2928 - Uncharacterized protein conserved in bacteria, NMA0228-like, at 3,420,506 to 3,421,375 _2928 Pf6N2E2_2929 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 3,421,372 to 3,422,130 _2929 Pf6N2E2_2930 - INTEGRAL MEMBRANE PROTEIN (Rhomboid family), at 3,422,127 to 3,422,606 _2930
Group Condition Pf6N2E2_2926 Pf6N2E2_2927 Pf6N2E2_2928 Pf6N2E2_2929 Pf6N2E2_2930
nitrogen source nitrogen source nitrate 20mM -0.7 -1.5 -0.1 -0.3 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.5 -0.9 +0.1 -0.3 -1.1
carbon source D-Alanine (C) -1.7 -0.4 -0.3 -0.2 -0.0
carbon source Ying_Nucleobase14 rep C; time point 3 +0.0 -0.9 -0.1 -0.7 -0.8
stress Zinc chloride 0.0000015625 M +0.6 -3.1 +0.0 -0.3 +0.3
stress Chlorite 0.00005 M +0.1 -0.7 -0.9 -1.0 +0.1
carbon source Ying_all64 rep C; time point 3 -0.0 -1.0 +0.2 -1.2 -0.5
carbon source Ying_all64 rep A; time point 3 +0.1 -1.2 +0.1 -0.8 -0.7
carbon source L-Leucine (C) -2.0 +0.1 -0.2 -0.1 -0.1
stress bromate 0.05 M -0.2 -1.8 -0.3 -0.4 +0.5
carbon source Ying_Others16 rep C; time point 3 -0.0 -2.0 +0.2 -1.0 +0.6
carbon source L-Leucine (C) -1.7 -0.0 +0.0 -0.1 -0.3
stress Bile salts 0.0125 M -0.5 -0.6 +0.1 -1.2 +0.2
lb LB no stress 48 hours -0.2 -1.3 +0.2 -0.4 -0.3
carbon source Ying_Nucleobase14 rep B; time point 3 +0.2 -1.0 +0.0 -1.2 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.4 -0.0 +0.3 -1.2 -0.5
carbon source Ying_Others16 rep B; time point 3 -0.1 -1.1 -0.1 -0.9 +0.5
carbon source m-Inositol (C) -0.5 -1.1 -0.1 +0.2 -0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -0.3 -1.1 +0.2 -0.5 +0.3
stress RCH2 defined with Cobalt chloride 0.04 mM -0.8 -1.0 +0.1 +0.4 -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 -1.5 +0.1 -0.4 +0.5
stress sodium iodate 0.005 M +0.2 -1.0 -0.0 +0.5 -0.8
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.2 +0.8 -0.1 -1.0 -1.0
stress Cobalt chloride 0.6 mM +0.1 -1.1 +0.2 +0.4 -0.5
carbon source D-Galactose (C) -0.8 +0.4 +0.1 +0.5 -0.6
carbon source Ying_Others16 rep C; time point 2 +0.3 +0.8 +0.0 -0.6 -1.0
nitrogen source nitrogen source nitrate 5mM +0.1 +1.0 +0.2 -0.8 -0.2
nitrogen source L-Isoleucine (N) +1.6 +0.2 -0.3 +0.0 -0.6
carbon source D-Glucosamine Hydrochloride (C) -0.1 +1.4 -0.2 +0.2 -0.5
nitrogen source L-Isoleucine (N) +1.4 +0.1 +0.0 +0.3 -0.7
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