Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2917 and Pf6N2E2_2918 are separated by 105 nucleotidesPf6N2E2_2918 and Pf6N2E2_2919 are separated by 411 nucleotidesPf6N2E2_2919 and Pf6N2E2_2920 overlap by 4 nucleotidesPf6N2E2_2920 and Pf6N2E2_2921 are separated by 199 nucleotides Pf6N2E2_2917 - FIG00953621: hypothetical protein, at 3,410,609 to 3,412,786 _2917 Pf6N2E2_2918 - hypothetical protein, at 3,412,892 to 3,413,839 _2918 Pf6N2E2_2919 - FIG00955830: hypothetical protein, at 3,414,251 to 3,414,556 _2919 Pf6N2E2_2920 - hypothetical protein, at 3,414,553 to 3,414,696 _2920 Pf6N2E2_2921 - ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data), at 3,414,896 to 3,416,023 _2921
Group Condition Pf6N2E2_2917 Pf6N2E2_2918 Pf6N2E2_2919 Pf6N2E2_2920 Pf6N2E2_2921
carbon source D-Alanine (C) +0.1 N.D. -1.9 N.D. -0.9
nitrogen source L-Phenylalanine (N) -0.1 N.D. -0.9 N.D. -1.4
carbon source L-Leucine (C) -0.2 N.D. -0.3 N.D. -1.9
stress thiosulfate 0.25 M +0.2 N.D. -2.5 N.D. -0.1
stress Nickel (II) chloride 0.0025 M -0.2 N.D. -2.1 N.D. +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 -0.5 N.D. -1.4 N.D. -0.4
nitrogen source L-Phenylalanine (N) +0.0 N.D. -0.9 N.D. -1.3
carbon source L-Leucine (C) +0.0 N.D. -0.1 N.D. -2.0
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.1 N.D. -1.5 N.D. -0.4
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 N.D. -1.8 N.D. -0.0
carbon source Ying_Others16 rep C; time point 3 -0.2 N.D. -1.2 N.D. -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.1 N.D. -1.5 N.D. +0.2
stress Choline Lysine 20 mM -0.1 N.D. -1.3 N.D. -0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.4 N.D. -1.0 N.D. +0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.0 N.D. -1.1 N.D. -0.3
carbon source L-Alanine (C) +0.2 N.D. -1.4 N.D. -0.2
lb LB +0.0 N.D. -1.4 N.D. +0.0
carbon source D-Mannose (C) +0.2 N.D. -1.5 N.D. -0.0
carbon source Ying_Others16 rep A; time point 1 -0.3 N.D. -1.2 N.D. +0.1
carbon source Ying_all64 rep A; time point 3 +0.0 N.D. -1.5 N.D. +0.1
vitamin With vitamins t1 +0.3 N.D. -1.6 N.D. -0.0
motility outer cut, LB soft agar motility assay -0.1 N.D. -1.3 N.D. +0.2
carbon source L-Leucine (C) -0.1 N.D. +0.3 N.D. -1.3
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.1 N.D. +1.0 N.D. -0.5
stress DEANONOate 0.000625 M +0.3 N.D. +1.1 N.D. -0.0
stress Bile salts 0.0125 M +0.3 N.D. +1.2 N.D. -0.0
nitrogen source Gly-Glu (N) +0.1 N.D. +0.9 N.D. +0.7
nitrogen source L-Isoleucine (N) -0.2 N.D. +0.4 N.D. +1.5
nitrogen source L-Serine (N) -0.0 N.D. +1.1 N.D. +0.6
nitrogen source L-Isoleucine (N) +0.2 N.D. +0.7 N.D. +1.7
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