Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2747 and Pf6N2E2_2748 are separated by 315 nucleotidesPf6N2E2_2748 and Pf6N2E2_2749 are separated by 10 nucleotidesPf6N2E2_2749 and Pf6N2E2_2750 are separated by 129 nucleotidesPf6N2E2_2750 and Pf6N2E2_2751 are separated by 29 nucleotides Pf6N2E2_2747 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 3,239,687 to 3,240,565 _2747 Pf6N2E2_2748 - Glycine cleavage system transcriptional antiactivator GcvR, at 3,240,881 to 3,241,441 _2748 Pf6N2E2_2749 - Thiol peroxidase, Bcp-type (EC 1.11.1.15), at 3,241,452 to 3,241,925 _2749 Pf6N2E2_2750 - Putative permease PerM (= YfgO), at 3,242,055 to 3,243,125 _2750 Pf6N2E2_2751 - Rhodanese-like domain protein, at 3,243,155 to 3,243,394 _2751
Group Condition Pf6N2E2_2747 Pf6N2E2_2748 Pf6N2E2_2749 Pf6N2E2_2750 Pf6N2E2_2751
carbon source Ying_Nucleobase14 rep A; time point 3 N.D. -0.8 -1.2 -1.1 N.D.
nitrogen source L-Serine (N) N.D. -0.3 -1.5 -1.0 N.D.
carbon source Ying_Nucleobase14 rep C; time point 3 N.D. -0.8 -1.2 -0.7 N.D.
carbon source Ying_Nucleobase14 rep B; time point 3 N.D. -0.8 -0.9 -0.7 N.D.
carbon source D-Xylose (C) N.D. -0.6 -0.5 -1.0 N.D.
carbon source octanoate (C) N.D. -0.6 -0.3 -1.2 N.D.
carbon source Carbon source Sucrose 5 mM N.D. -0.6 -0.5 -0.9 N.D.
carbon source D-Galactose (C) N.D. -0.8 -0.9 -0.3 N.D.
stress Choline Lysine 20 mM N.D. -0.2 -0.9 -0.7 N.D.
stress RCH2 defined with Cobalt chloride 0.02 mM N.D. -0.4 -0.6 -0.8 N.D.
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. -0.4 -0.5 -0.9 N.D.
stress Cisplatin 0.008 mg/ml N.D. -0.4 -0.1 -1.3 N.D.
stress RCH2 defined with Nickel (II) chloride 0.04 mM N.D. -0.2 -0.5 -1.0 N.D.
stress RCH2 defined with Nickel (II) chloride 0.04 mM N.D. -0.3 -0.8 -0.6 N.D.
carbon source octanoate (C) N.D. -0.6 -0.1 -1.0 N.D.
carbon source Carbon source D,L-Lactate 10 mM N.D. -0.5 -0.3 -0.9 N.D.
carbon source Carbon source D-Glucose 10 mM N.D. -0.6 -0.5 -0.6 N.D.
carbon source RCH2_defined N.D. -0.2 -0.8 -0.7 N.D.
carbon source Glycerol (C) N.D. -0.4 -0.4 -0.7 N.D.
stress bromate 0.05 M N.D. -0.6 -0.2 -0.7 N.D.
nitrogen source L-Serine (N) N.D. -0.1 -0.3 -1.2 N.D.
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. -0.0 -0.2 -1.3 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. +0.5 -0.1 -0.9 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. +0.7 -1.1 -0.0 N.D.
motility inner cut, LB soft agar motility assay N.D. -0.3 -0.5 +0.9 N.D.
motility outer cut, LB soft agar motility assay N.D. -0.1 -0.4 +1.0 N.D.
stress Cobalt chloride 0.6 mM N.D. +0.3 -0.3 +1.0 N.D.
stress Cobalt chloride 0.6 mM N.D. +0.7 -0.2 +0.9 N.D.
stress Cobalt chloride 0.6 mM N.D. +0.5 -0.2 +1.1 N.D.
stress dimethyl sulfone 0.25 M N.D. +0.5 +0.6 +0.8 N.D.
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