Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2627 and Pf6N2E2_2628 are separated by 49 nucleotidesPf6N2E2_2628 and Pf6N2E2_2629 are separated by 346 nucleotidesPf6N2E2_2629 and Pf6N2E2_2630 are separated by 411 nucleotidesPf6N2E2_2630 and Pf6N2E2_2631 are separated by 54 nucleotides Pf6N2E2_2627 - Flagellar basal-body rod protein FlgG, at 3,088,843 to 3,089,628 _2627 Pf6N2E2_2628 - Flagellar basal-body rod protein FlgF, at 3,089,678 to 3,090,415 _2628 Pf6N2E2_2629 - Phenylalanine hydroxylase transcriptional activator PhhR, at 3,090,762 to 3,092,324 _2629 Pf6N2E2_2630 - Phenylalanine 4-monooxygenase (EC 1.14.16.1) (from data), at 3,092,736 to 3,093,521 _2630 Pf6N2E2_2631 - Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96), at 3,093,576 to 3,093,977 _2631
Group Condition Pf6N2E2_2627 Pf6N2E2_2628 Pf6N2E2_2629 Pf6N2E2_2630 Pf6N2E2_2631
motility inner cut, LB soft agar motility assay -6.2 -7.1 +0.1 +0.3 N.D.
motility inner cut, LB soft agar motility assay -6.5 -5.4 +0.3 +0.4 N.D.
nitrogen source L-Phenylalanine (N) +0.2 -0.1 -5.6 -4.7 N.D.
motility outer cut, LB soft agar motility assay -7.2 -2.8 -0.1 +0.5 N.D.
motility inner cut, LB soft agar motility assay -4.6 -5.3 +0.1 +0.8 N.D.
motility outer cut, LB soft agar motility assay -4.1 -5.8 +0.5 +0.6 N.D.
nitrogen source L-Phenylalanine (N) +0.6 +0.3 -4.8 -4.6 N.D.
carbon source L-Phenylalanine (C) +0.8 +1.1 -4.7 -5.5 N.D.
carbon source L-Phenylalanine (C) +1.3 +0.9 -4.8 -3.7 N.D.
stress Chlorite 0.00005 M +0.6 +0.8 -2.6 -2.3 N.D.
stress Cobalt chloride 0.6 mM -0.1 -0.5 -0.5 -1.5 N.D.
stress Chlorite 0.08 mM +0.7 +0.4 -0.8 -0.8 N.D.
stress Magnesium chloride 0.125 M -0.3 -0.8 +0.8 +1.0 N.D.
stress molybdate 0.25 M -0.5 -0.7 +1.0 +1.0 N.D.
stress tungstate 0.05 M +0.1 -1.0 +1.2 +1.4 N.D.
carbon source Ying_Others16 rep A; time point 2 +1.2 +0.8 +0.4 -0.5 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 +1.3 +1.5 -0.3 -0.5 N.D.
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +1.2 +1.2 +0.1 -0.5 N.D.
carbon source Ying_Nucleobase14 rep C; time point 3 +1.1 +1.2 +0.1 -0.3 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 +1.1 +1.4 -0.1 -0.3 N.D.
carbon source Ying_Others16 rep C; time point 3 +1.2 +1.3 +0.1 -0.4 N.D.
stress tungstate 0.05 M -0.6 -0.1 +1.6 +1.6 N.D.
nitrogen source Cytidine (N) +1.5 +1.3 -0.2 -0.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +1.7 +1.7 -0.3 -0.8 N.D.
carbon source Ying_Others16 rep A; time point 3 +1.4 +1.7 -0.3 -0.4 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 +1.2 +1.6 +0.1 -0.2 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B +1.2 +1.1 +0.5 +0.2 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +1.9 +2.1 -0.2 -0.7 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +1.4 +1.0 +0.4 +0.4 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C +1.4 +1.4 +0.3 +0.2 N.D.
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