Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Pf6N2E2_2622	Pf6N2E2_2623	Pf6N2E2_2624	Pf6N2E2_2625	Pf6N2E2_2626
motility	inner cut, LB soft agar motility assay	-5.8	-5.4	-6.0	-6.2	-5.2
motility	inner cut, LB soft agar motility assay	-5.4	-5.3	-5.3	-4.9	-5.8
motility	inner cut, LB soft agar motility assay	-5.0	-5.6	-4.9	-5.9	-4.1
motility	outer cut, LB soft agar motility assay	-4.5	-3.5	-4.6	-5.6	-3.9
motility	outer cut, LB soft agar motility assay	-4.3	-3.8	-5.4	-3.0	-2.8
denitrifying	Nitrate reduction, replicate A	+0.3	+0.4	+1.0	+1.2	+0.7
carbon source	D-Trehalose (C)	+0.5	+0.6	+0.6	+0.9	+0.9
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C	-0.1	+0.4	+1.2	+1.1	+0.9
carbon source	Ying_Nucleobase14 rep C; time point 3	+0.7	+0.8	+0.7	+0.8	+0.7
carbon source	Ying_Others16 rep C; time point 3	+0.2	+0.4	+1.2	+0.9	+1.1
resistance	50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine	+0.8	+0.8	+0.6	+0.7	+0.8
carbon source	Ying_all64 rep C; time point 3	+0.4	+0.6	+0.7	+1.1	+1.0
carbon source	Ying_Others16 rep A; time point 2	+0.5	+0.5	+1.3	+0.8	+0.8
carbon source	L-Phenylalanine (C)	+0.2	+0.6	+1.0	+0.9	+1.1
carbon source	L-Phenylalanine (C)	+0.3	+0.6	+1.0	+1.1	+0.9
carbon source	4-Hydroxybenzoic Acid (C)	+0.5	+0.6	+0.8	+1.0	+1.0
nitrogen source	Cytidine (N)	+0.5	+0.5	+1.0	+0.9	+1.0
resistance	10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine	+0.8	+0.8	+0.7	+0.7	+0.9
carbon source	4-Hydroxybenzoic Acid (C)	+0.7	+0.9	+0.6	+0.8	+0.9
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B	+0.0	+0.4	+1.1	+1.4	+1.1
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A	+0.0	+0.5	+1.2	+1.4	+1.0
carbon source	D-Xylose (C)	+0.7	+1.0	+0.7	+0.7	+1.0
carbon source	Ying_AminoAcid20 rep B; time point 3	+0.4	+0.7	+1.1	+1.0	+1.3
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B	-0.0	+0.6	+1.3	+1.5	+1.2
resistance	50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine	+1.1	+0.9	+0.9	+1.0	+1.0
carbon source	Ying_Others16 rep A; time point 3	+0.3	+0.6	+1.4	+1.4	+1.3
carbon source	Ying_AminoAcid20 rep A; time point 3	+0.7	+0.9	+1.2	+1.1	+1.5
nitrogen source	Cytidine (N)	+0.8	+0.9	+0.9	+1.6	+1.5
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C	+0.5	+0.9	+1.4	+1.7	+1.2
carbon source	Ying_AminoAcid20 rep C; time point 3	+0.7	+1.0	+1.4	+1.3	+1.8