Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_2614 and Pf6N2E2_2615 overlap by 11 nucleotidesPf6N2E2_2615 and Pf6N2E2_2616 overlap by 4 nucleotidesPf6N2E2_2616 and Pf6N2E2_2617 overlap by 4 nucleotidesPf6N2E2_2617 and Pf6N2E2_2618 overlap by 4 nucleotides Pf6N2E2_2614 - C-methyltransferase, at 3,072,522 to 3,073,592 _2614 Pf6N2E2_2615 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 3,073,582 to 3,074,439 _2615 Pf6N2E2_2616 - methyltransferase, putative, at 3,074,436 to 3,075,662 _2616 Pf6N2E2_2617 - dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13), at 3,075,659 to 3,076,219 _2617 Pf6N2E2_2618 - Similar to CDP-glucose 4,6-dehydratase (EC 4.2.1.45), at 3,076,216 to 3,077,289 _2618
Group Condition Pf6N2E2_2614 Pf6N2E2_2615 Pf6N2E2_2616 Pf6N2E2_2617 Pf6N2E2_2618
stress Zinc chloride 0.0000015625 M -0.1 +0.6 -0.0 -1.6 -0.3
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B -0.1 -0.2 -0.5 -0.6 -0.1
stress copper (II) chloride 3 mM -0.4 -0.4 -0.0 -0.3 -0.4
carbon source D-Galactose (C) +0.1 -0.2 -0.3 -0.4 -0.6
stress DEANONOate 0.000625 M -0.2 +0.3 -0.3 -0.8 -0.4
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A -0.0 -0.1 -0.3 -0.6 -0.2
denitrifying Nitrate reduction, replicate C -0.2 -0.1 -0.1 -0.6 -0.2
vitamin No vitamins t1 -0.1 -0.5 -0.2 +0.3 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.4 -0.2 +0.0 -0.2 +0.4
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.3 +0.2 +0.4 -0.3
lb LB no stress 48 hours +0.0 +0.6 +0.1 -0.1 -0.4
stress RCH2 defined with Cobalt chloride 0.04 mM -0.4 +0.1 +0.2 +0.3 +0.2
carbon source Ying_Others16 rep A; time point 1 +0.3 -0.3 +0.2 +0.5 -0.3
carbon source propionate (C) -0.0 +0.2 -0.0 +0.6 -0.2
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.2 +0.5 +0.1 -0.1 +0.4
carbon source Carnitine Hydrochloride (C) +0.2 -0.2 +0.1 +0.4 +0.2
lb LB no stress 48 hours +0.3 +0.7 -0.1 +0.1 -0.3
stress Nickel (II) chloride 0.0025 M -0.1 +0.5 -0.1 +0.4 +0.1
stress perchlorate 0.125 M +0.1 +0.3 +0.1 +0.7 -0.2
stress Cobalt chloride 0.6 mM +0.0 -0.1 +0.2 +0.4 +0.5
lb LB no stress 48 hours +0.5 +0.1 +0.2 +0.4 -0.1
stress Aluminum chloride 0.00005 M +0.3 +0.2 -0.1 +0.5 +0.1
stress sodium carbonate 0.0125 M +0.3 +0.2 +0.2 +0.4 -0.0
carbon source L-Leucine (C) +0.1 +0.3 +0.2 +0.4 +0.2
stress dimethyl sulfone 0.25 M +0.1 +0.3 +0.2 +0.4 +0.2
stress Doxycycline hyclate 0.0001 mg/ml -0.0 +0.4 +0.5 +0.0 +0.4
motility inner cut, LB soft agar motility assay +0.3 +0.3 +0.3 +0.4 +0.2
motility outer cut, LB soft agar motility assay +0.6 +0.2 +0.4 -0.0 +0.3
motility inner cut, LB soft agar motility assay +0.3 +0.2 +0.5 +0.4 +0.3
motility inner cut, LB soft agar motility assay +0.8 +0.3 +0.6 +0.5 +0.4
remove
Pf6N2E2_2614
plot		 remove
Pf6N2E2_2615
plot		 remove
Pf6N2E2_2616		 remove
Pf6N2E2_2617
plot		 remove
Pf6N2E2_2618
plot