Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_257 and Pf6N2E2_258 are separated by 145 nucleotidesPf6N2E2_258 and Pf6N2E2_259 are separated by 238 nucleotidesPf6N2E2_259 and Pf6N2E2_260 are separated by 56 nucleotidesPf6N2E2_260 and Pf6N2E2_261 are separated by 198 nucleotides Pf6N2E2_257 - Exoenzymes regulatory protein AepA precursor, at 320,354 to 322,192 _257 Pf6N2E2_258 - Nicotinamidase family protein YcaC, at 322,338 to 322,967 _258 Pf6N2E2_259 - Transcriptional regulator, LysR family, at 323,206 to 324,084 _259 Pf6N2E2_260 - Regulator of cell morphogenesis and NO signaling, at 324,141 to 324,617 _260 Pf6N2E2_261 - Aminobutyraldehyde dehydrogenase (EC 1.2.1.19), at 324,816 to 325,925 _261
Group Condition Pf6N2E2_257 Pf6N2E2_258 Pf6N2E2_259 Pf6N2E2_260 Pf6N2E2_261
stress Cobalt chloride 0.6 mM -0.3 -0.3 -0.1 -0.7 -0.0
stress Nickel (II) chloride 0.0025 M -0.3 -0.3 -0.1 -0.7 -0.1
nitrogen source Glucuronamide (N) +0.2 -0.2 +0.0 -1.0 -0.2
stress Hydroxide 0.05 M -0.2 -0.7 +0.1 -0.3 -0.0
stress deoxycholate 0.0125 M +0.1 +0.1 -0.3 -0.6 -0.3
vitamin No vitamins t1 -0.4 +0.1 -0.6 +0.2 -0.3
motility inner cut, LB soft agar motility assay -0.1 -0.2 -0.1 -0.8 +0.4
denitrifying Nitrate reduction, replicate B -0.1 +0.4 -0.4 -0.5 -0.1
stress Cadmium chloride hemipentahydrate 0.00005 M -0.0 -0.6 +0.3 -0.4 -0.0
nitrogen source nitrogen source nitrite 0.5mM -0.4 +0.0 +0.5 -0.7 -0.1
lb LB no stress 48 hours -0.5 +0.4 -0.6 +0.2 -0.1
stress Manganese (II) chloride tetrahydrate 0.00078125 M +0.1 -0.7 -0.3 +0.4 +0.1
stress Cobalt chloride 0.4 mM +0.0 -0.3 +0.4 -0.6 +0.2
nitrogen source Putrescine (N) +0.2 -0.7 +0.3 -0.0 -0.2
stress sodium iodate 0.005 M +0.3 -0.2 +0.1 -0.7 +0.2
carbon source L-Leucine (C) +0.5 -0.7 -0.0 +0.3 -0.2
nitrogen source Cytidine (N) +0.2 -0.1 +0.3 -0.6 +0.2
carbon source Ying_sugar7 rep C; time point 2 -0.0 +0.1 -0.4 +0.7 -0.5
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 +0.6 +0.4 -0.5 -0.2
stress Hydroxylamine 0.5 M -0.1 +0.5 +0.0 -0.5 +0.4
stress Bile salts 0.0125 M -0.5 +0.5 +0.1 +0.7 -0.5
stress Gjerstad humics 0.5 M +0.1 +0.3 -0.3 +0.5 -0.2
stress thiosulfate 0.25 M -0.2 -0.4 +0.4 +0.7 -0.1
lb LB no stress 48 hours +0.1 +0.3 -0.1 +0.6 -0.3
stress DEANONOate 0.000625 M +0.3 +0.4 +0.5 -0.5 -0.1
stress Chloride 0.5 M -0.3 +0.5 -0.1 +0.5 -0.0
stress Hydroxide 0.05 M -0.2 +0.7 -0.0 +0.4 -0.1
stress molybdate 0.25 M +0.3 +0.7 -0.4 +0.4 -0.1
nitrogen source nitrogen source nitrite 1mM -0.0 +0.3 -0.1 +0.8 +0.2
nitrogen source nitrogen source nitrate 20mM +0.1 +0.9 +0.3 +0.1 +0.1
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