Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2581 and Pf6N2E2_2582 are separated by 0 nucleotidesPf6N2E2_2582 and Pf6N2E2_2583 are separated by 72 nucleotidesPf6N2E2_2583 and Pf6N2E2_2584 are separated by 9 nucleotidesPf6N2E2_2584 and Pf6N2E2_2585 are separated by 232 nucleotides Pf6N2E2_2581 - Flagellar biosynthesis protein FliQ, at 3,039,690 to 3,040,127 _2581 Pf6N2E2_2582 - Flagellar motor switch protein FliN, at 3,040,128 to 3,040,586 _2582 Pf6N2E2_2583 - Flagellar motor switch protein FliM, at 3,040,659 to 3,041,627 _2583 Pf6N2E2_2584 - Flagellar biosynthesis protein FliL, at 3,041,637 to 3,042,140 _2584 Pf6N2E2_2585 - Flagellar hook-length control protein FliK, at 3,042,373 to 3,043,746 _2585
Group Condition Pf6N2E2_2581 Pf6N2E2_2582 Pf6N2E2_2583 Pf6N2E2_2584 Pf6N2E2_2585
motility inner cut, LB soft agar motility assay N.D. -6.5 -5.9 -0.5 -6.4
motility outer cut, LB soft agar motility assay N.D. -6.6 -5.5 -0.0 -6.0
motility inner cut, LB soft agar motility assay N.D. -5.9 -5.1 -0.1 -4.9
motility inner cut, LB soft agar motility assay N.D. -4.3 -5.2 -0.3 -5.7
motility outer cut, LB soft agar motility assay N.D. -0.6 -3.6 -0.3 -4.9
carbon source Ying_Others16 rep A; time point 2 N.D. -1.2 +0.8 +0.6 +0.8
vitamin No vitamins t2 N.D. +0.8 +1.0 +0.6 +0.9
carbon source D-Xylose (C) N.D. +0.7 +1.1 +0.7 +0.8
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine N.D. +0.9 +1.1 +0.5 +0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. +1.1 +1.1 +0.4 +0.8
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. -0.0 +1.3 +0.8 +1.3
carbon source L-Phenylalanine (C) N.D. +0.9 +1.1 +0.6 +0.9
carbon source Ying_Others16 rep C; time point 3 N.D. +0.4 +1.2 +0.8 +1.1
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. +0.8 +1.2 +0.6 +0.9
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. +0.8 +1.2 +0.7 +0.9
denitrifying Nitrate reduction, replicate A N.D. +1.1 +0.9 +0.8 +0.8
carbon source Ying_Others16 rep A; time point 3 N.D. +0.2 +1.4 +1.0 +1.1
carbon source L-Phenylalanine (C) N.D. +1.2 +1.0 +0.6 +1.1
denitrifying Nitrate reduction, replicate B N.D. +1.5 +1.1 +0.6 +0.7
nitrogen source Cytidine (N) N.D. +1.6 +0.8 +0.7 +1.0
carbon source octanoate (C) N.D. +1.8 +1.0 +0.9 +0.5
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C N.D. +1.5 +1.2 +0.9 +0.9
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A N.D. +1.4 +1.4 +1.0 +0.7
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. +0.5 +1.6 +0.9 +1.7
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B N.D. +1.6 +1.3 +0.9 +1.0
nitrogen source Cytidine (N) N.D. +1.2 +1.6 +1.0 +1.2
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A N.D. +1.9 +1.4 +0.8 +1.0
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B N.D. +1.6 +1.4 +1.2 +1.2
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. +0.6 +2.0 +1.1 +1.8
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C N.D. +1.9 +1.6 +0.9 +1.2
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