Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2577 and Pf6N2E2_2578 are separated by 3 nucleotidesPf6N2E2_2578 and Pf6N2E2_2579 are separated by 4 nucleotidesPf6N2E2_2579 and Pf6N2E2_2580 are separated by 23 nucleotidesPf6N2E2_2580 and Pf6N2E2_2581 overlap by 1 nucleotides Pf6N2E2_2577 - Flagellar biosynthesis protein FlhB, at 3,036,721 to 3,037,857 _2577 Pf6N2E2_2578 - Flagellar biosynthesis protein FliR, at 3,037,861 to 3,038,643 _2578 Pf6N2E2_2579 - Flagellar biosynthesis protein FliQ, at 3,038,648 to 3,038,917 _2579 Pf6N2E2_2580 - Flagellar biosynthesis protein FliP, at 3,038,941 to 3,039,690 _2580 Pf6N2E2_2581 - Flagellar biosynthesis protein FliQ, at 3,039,690 to 3,040,127 _2581
Group Condition Pf6N2E2_2577 Pf6N2E2_2578 Pf6N2E2_2579 Pf6N2E2_2580 Pf6N2E2_2581
motility inner cut, LB soft agar motility assay -4.2 -7.3 -6.2 -5.8 N.D.
motility inner cut, LB soft agar motility assay -4.9 -6.7 -5.2 -5.2 N.D.
motility outer cut, LB soft agar motility assay -5.0 -4.4 -5.8 -5.0 N.D.
motility outer cut, LB soft agar motility assay -4.9 -4.2 -3.9 -4.8 N.D.
motility inner cut, LB soft agar motility assay -3.9 -3.0 -4.8 -4.9 N.D.
stress Vancomycin 0.24 mg/ml -0.7 -2.1 -1.0 -1.1 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 +1.1 -1.9 +1.5 +0.4 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 +1.1 -1.9 +1.4 +0.6 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 +1.2 -1.9 +1.5 +0.7 N.D.
carbon source Ying_Others16 rep B; time point 3 +1.0 -1.6 +1.3 +0.9 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 +1.4 -1.9 +1.5 +0.7 N.D.
carbon source Ying_Others16 rep C; time point 3 +1.3 -1.5 +1.5 +0.8 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +1.4 -1.8 +1.7 +1.1 N.D.
carbon source Ying_Others16 rep A; time point 3 +1.3 -1.6 +1.6 +1.3 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +1.6 -1.8 +1.8 +1.2 N.D.
denitrifying Nitrate reduction, replicate B +1.1 +1.1 +1.3 +1.1 N.D.
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +1.1 +1.0 +1.0 +1.5 N.D.
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +1.1 +1.5 +1.0 +1.3 N.D.
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +1.1 +1.3 +0.9 +1.4 N.D.
carbon source D-Xylose (C) +1.1 +1.3 +1.3 +1.1 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A +1.2 +1.5 +1.0 +1.2 N.D.
carbon source L-Phenylalanine (C) +1.0 +1.3 +1.2 +1.5 N.D.
nitrogen source Cytidine (N) +1.1 +1.7 +1.1 +1.1 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C +1.2 +1.2 +1.3 +1.4 N.D.
denitrifying Nitrate reduction, replicate A +1.1 +1.3 +1.4 +1.4 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B +1.3 +1.2 +1.5 +1.7 N.D.
nitrogen source Cytidine (N) +1.3 +2.0 +1.2 +1.3 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +1.4 +1.6 +1.7 +1.6 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B +1.4 +1.5 +1.6 +2.0 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C +1.6 +1.5 +1.7 +2.0 N.D.
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