Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_255 and Pf6N2E2_256 overlap by 8 nucleotidesPf6N2E2_256 and Pf6N2E2_257 are separated by 118 nucleotidesPf6N2E2_257 and Pf6N2E2_258 are separated by 145 nucleotidesPf6N2E2_258 and Pf6N2E2_259 are separated by 238 nucleotides Pf6N2E2_255 - DoxX family protein, at 319,191 to 319,604 _255 Pf6N2E2_256 - putative membrane protein, at 319,597 to 320,235 _256 Pf6N2E2_257 - Exoenzymes regulatory protein AepA precursor, at 320,354 to 322,192 _257 Pf6N2E2_258 - Nicotinamidase family protein YcaC, at 322,338 to 322,967 _258 Pf6N2E2_259 - Transcriptional regulator, LysR family, at 323,206 to 324,084 _259
Group Condition Pf6N2E2_255 Pf6N2E2_256 Pf6N2E2_257 Pf6N2E2_258 Pf6N2E2_259
vitamin With vitamins t2 -0.4 -0.5 -0.2 +0.0 -0.6
vitamin No vitamins t1 -0.3 -0.4 -0.4 +0.1 -0.6
stress Zinc chloride 0.0000015625 M -1.2 +0.2 -0.3 -0.2 +0.5
carbon source RCH2_defined -0.5 -0.3 +0.0 -0.4 +0.3
stress Hydroxide 0.05 M -0.3 +0.2 -0.2 -0.7 +0.1
stress thiosulfate 0.25 M -0.1 -0.6 -0.2 -0.4 +0.4
carbon source L-Leucine (C) -0.5 -0.0 +0.5 -0.7 -0.0
nitrogen source L-Serine (N) -0.8 -0.4 +0.2 +0.3 -0.1
nitrogen source nitrogen source nitrate 5mM -0.8 +0.4 -0.3 -0.3 +0.4
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.5 -0.1 +0.1 -0.4 +0.4
nitrogen source L-Serine (N) -0.5 -0.3 +0.4 -0.1 +0.1
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml -0.9 +0.2 -0.1 -0.1 +0.3
stress Hydroxylamine 0.5 M -1.0 +0.1 -0.1 +0.5 +0.0
carbon source RCH2_defined -0.7 +0.2 +0.2 +0.3 -0.3
nitrogen source Putrescine (N) -0.2 +0.2 +0.2 -0.7 +0.3
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.7 +0.3 +0.2 -0.2 +0.3
stress Bile salts 0.0125 M +0.4 -0.7 -0.5 +0.5 +0.1
lb LB no stress 48 hours +0.4 +0.2 -0.5 +0.4 -0.6
stress bromate 0.05 M -0.5 -0.0 +0.1 +0.7 -0.3
stress Cadmium chloride hemipentahydrate 0.00005 M +0.1 +0.5 -0.0 -0.6 +0.3
stress molybdate 0.25 M -0.1 -0.0 +0.3 +0.7 -0.4
nitrogen source nitrogen source nitrite 0.5mM -0.1 +0.5 -0.4 +0.0 +0.5
stress Nickel (II) chloride 1.5 mM +0.4 +0.2 +0.1 -0.5 +0.4
stress DEANONOate 0.000625 M -0.7 +0.1 +0.1 +0.6 +0.5
stress Chlorite 0.00005 M -0.4 +0.3 +0.3 +0.4 +0.2
nitrogen source nitrogen source nitrate 20mM -0.1 -0.2 +0.1 +0.9 +0.3
carbon source Ying_sugar7 rep B; time point 2 +1.3 +0.3 -0.4 +0.0 -0.2
carbon source octanoate (C) +0.2 +0.4 +0.3 +0.6 -0.3
carbon source D-Glucosamine Hydrochloride (C) +0.5 +0.2 +0.2 +0.5 -0.0
stress DEANONOate 0.000625 M +0.2 +0.6 +0.3 +0.4 +0.5
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