Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2468 and Pf6N2E2_2469 are separated by 51 nucleotidesPf6N2E2_2469 and Pf6N2E2_2470 are separated by 16 nucleotidesPf6N2E2_2470 and Pf6N2E2_2471 are separated by 164 nucleotidesPf6N2E2_2471 and Pf6N2E2_2472 are separated by 202 nucleotides Pf6N2E2_2468 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 2,917,084 to 2,918,037 _2468 Pf6N2E2_2469 - hypothetical protein, at 2,918,089 to 2,918,289 _2469 Pf6N2E2_2470 - 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54), at 2,918,306 to 2,919,382 _2470 Pf6N2E2_2471 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 2,919,547 to 2,919,828 _2471 Pf6N2E2_2472 - hypothetical protein, at 2,920,031 to 2,920,144 _2472
Group Condition Pf6N2E2_2468 Pf6N2E2_2469 Pf6N2E2_2470 Pf6N2E2_2471 Pf6N2E2_2472
carbon source octanoate (C) -0.7 -1.3 -1.6 -3.3 -2.1
stress deoxycholate 0.0125 M +0.3 -0.8 -0.3 -2.3 -5.1
carbon source octanoate (C) -0.6 -1.0 -1.5 -2.6 -1.4
stress Doxycycline hyclate 0.0001 mg/ml -0.6 -1.6 -2.0 -1.7 -1.1
stress Hydroxylamine 0.5 M -0.3 -2.1 -0.7 -1.4 -1.6
stress pyrophosphate 0.0025 M -0.8 -1.0 -0.9 -1.7 -1.5
stress Fusidic 0.4 mg/ml -0.4 -1.3 -0.5 -1.6 -1.8
stress periodate 0.00125 M -0.4 -1.4 -0.3 -1.2 -2.2
stress sodium iodate 0.005 M -0.7 -0.3 -0.5 -1.0 -2.9
stress Fusidic 0.3 mg/ml -0.9 -0.9 -0.7 -1.5 -1.3
stress Choline Lysine 20 mM -0.7 -1.3 -1.0 -1.1 -1.1
stress Lomefloxacin 0.0002 mM -0.8 -1.0 -0.6 -1.1 -1.4
stress Gjerstad humics 0.5 M -0.7 -0.4 -0.6 -1.1 -1.7
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.7 -1.7 -0.9 -0.7 -0.4
stress Aluminum chloride 4 mM -0.7 -0.8 -1.2 -1.0 -0.7
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.9 -1.4 -0.9 -0.7 -0.5
carbon source D-Alanine (C) -0.6 +0.3 -0.2 -3.0 -0.9
nitrogen source Cytidine (N) -0.2 -0.7 -1.8 -0.5 -1.0
carbon source D-Xylose (C) +0.2 +1.2 +1.1 +0.2 +1.3
motility inner cut, LB soft agar motility assay +0.9 +0.3 +0.3 +1.3 +1.3
carbon source L-Histidine (C) +0.8 +1.3 +0.8 +0.6 +0.8
motility outer cut, LB soft agar motility assay +0.4 +1.1 +0.4 +1.1 +1.5
motility inner cut, LB soft agar motility assay +0.2 +1.0 +0.6 +1.2 +1.9
carbon source D-Glucosamine Hydrochloride (C) +0.8 +1.5 +0.8 +0.9 +1.6
stress RCH2 defined with Cobalt chloride 0.04 mM +0.6 +0.3 +1.7 +2.8 +0.7
stress RCH2 defined with Cobalt chloride 0.04 mM +0.7 +0.9 +1.4 +2.8 +0.6
carbon source D-Glucosamine Hydrochloride (C) +0.9 +1.9 +0.9 +1.4 +2.6
carbon source D-Galactose (C) +0.5 +2.3 +2.8 +1.7 +2.8
carbon source D-Galactose (C) +0.8 +2.3 +3.3 +1.7 +2.2
carbon source D-Fructose (C) +1.0 +2.9 +2.7 +1.4 +3.2
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Pf6N2E2_2468
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Pf6N2E2_2469
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