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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf6N2E2_2453 and Pf6N2E2_2454 are separated by 128 nucleotides
Pf6N2E2_2454 and Pf6N2E2_2455 are separated by 64 nucleotides
Pf6N2E2_2455 and Pf6N2E2_2456 are separated by 70 nucleotides
Pf6N2E2_2456 and Pf6N2E2_2457 overlap by 11 nucleotides
Pf6N2E2_2453 - 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase II (EC 2.5.1.54), at 2,904,399 to 2,905,748
_2453
Pf6N2E2_2454 - FIG074102: hypothetical protein, at 2,905,877 to 2,907,106
_2454
Pf6N2E2_2455 - FIG00953957: hypothetical protein, at 2,907,171 to 2,907,389
_2455
Pf6N2E2_2456 - Transcriptional regulator, LysR family, at 2,907,460 to 2,908,341
_2456
Pf6N2E2_2457 - putative membrane protein, at 2,908,331 to 2,909,080
_2457
Group
Condition
Pf6N2E2
_2453
Pf6N2E2
_2454
Pf6N2E2
_2455
Pf6N2E2
_2456
Pf6N2E2
_2457
stress
Zinc chloride 0.0000015625 M
-0.1
+0.0
-0.8
-1.3
-0.1
resistance
20 mM putrescine
-0.0
-0.1
-1.3
-0.7
+0.1
nitrogen source
Urea (N)
-0.1
+0.1
-0.8
-0.9
-0.0
resistance
10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine
+0.1
-0.1
-1.2
-0.6
+0.1
resistance
50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine
-0.0
-0.1
-0.7
-0.8
-0.1
nitrogen source
Urea (N)
+0.0
+0.1
-1.1
-0.9
+0.3
stress
RCH2 defined with Cobalt chloride 0.02 mM
-0.2
-0.2
-0.1
-0.1
-1.1
resistance
50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine
+0.0
-0.1
-0.8
-0.5
-0.1
resistance
50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
+0.1
+0.0
-1.0
-0.5
-0.1
stress
Hydroxylamine 0.5 M
-0.8
+0.1
-0.2
+0.3
-0.7
carbon source
D-Xylose (C)
+0.1
-0.1
-0.3
-0.7
-0.2
resistance
10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
-0.1
-0.1
-1.2
-0.1
+0.3
stress
RCH2 defined with Nickel (II) chloride 0.04 mM
-0.2
+0.2
-0.4
-0.2
-0.6
carbon source
RCH2_defined
+0.0
-0.1
-0.4
+0.5
-1.0
stress
deoxycholate 0.0125 M
+0.4
+0.1
-0.8
-1.0
+0.3
stress
RCH2 defined with copper (II) chloride 0.03 mM
-0.1
-0.2
-0.6
+0.4
-0.4
resistance
10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine
+0.2
-0.0
-1.0
-0.1
+0.3
vitamin
No vitamins t2
-0.3
+0.2
-0.2
-0.5
+0.4
nitrogen source
L-Arginine (N)
+0.3
-0.3
-0.2
-0.3
+0.4
stress
RCH2 defined with Cobalt chloride 0.04 mM
+0.2
+0.0
-0.2
+0.6
-0.6
carbon source
Ying_sugar7 rep C; time point 2
-0.3
-0.2
-0.1
+0.9
+0.1
stress
RCH2 defined with Cobalt chloride 0.04 mM
-0.0
-0.0
-0.2
+1.0
-0.3
carbon source
Ying_sugar7 rep B; time point 2
+0.1
-0.2
-0.1
+1.0
-0.3
carbon source
D-Galactose (C)
-0.2
-0.2
+0.4
+0.7
+0.1
carbon source
Glycerol (C)
-0.3
-0.1
+0.5
+0.5
+0.2
carbon source
L-Histidine (C)
-0.1
+0.1
+0.5
+0.5
+0.3
carbon source
D-Sorbitol (C)
+0.2
+0.0
+0.7
+0.8
-0.2
motility
inner cut, LB soft agar motility assay
+0.3
+0.4
+0.3
+0.3
+0.4
nitrogen source
Gly-Glu (N)
-0.1
+0.0
+2.3
+2.1
-0.1
nitrogen source
Gly-Glu (N)
+0.3
-0.1
+2.3
+2.4
+0.3
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Pf6N2E2_2455
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