Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2439 and Pf6N2E2_2440 are separated by 0 nucleotidesPf6N2E2_2440 and Pf6N2E2_2441 overlap by 4 nucleotidesPf6N2E2_2441 and Pf6N2E2_2442 are separated by 163 nucleotidesPf6N2E2_2442 and Pf6N2E2_2443 overlap by 17 nucleotides Pf6N2E2_2439 - Adenylate cyclase (EC 4.6.1.1), at 2,888,047 to 2,890,995 _2439 Pf6N2E2_2440 - Free methionine-(R)-sulfoxide reductase, contains GAF domain, at 2,890,996 to 2,891,478 _2440 Pf6N2E2_2441 - putative ATP/GTP-binding protein, at 2,891,475 to 2,892,365 _2441 Pf6N2E2_2442 - sensor histidine kinase/response regulator, at 2,892,529 to 2,894,850 _2442 Pf6N2E2_2443 - Organic hydroperoxide resistance transcriptional regulator, at 2,894,834 to 2,895,295 _2443
Group Condition Pf6N2E2_2439 Pf6N2E2_2440 Pf6N2E2_2441 Pf6N2E2_2442 Pf6N2E2_2443
stress RCH2 defined with Cobalt chloride 0.02 mM -0.0 -3.1 -0.1 -0.4 -0.1
stress DEANONOate 0.000625 M -0.0 -2.7 -0.2 -0.4 +0.1
carbon source D-Mannose (C) -0.1 -2.7 -0.0 -0.5 +0.2
nitrogen source Glucuronamide (N) -0.1 -2.6 +0.2 -0.4 -0.2
stress Gjerstad humics 0.5 M -0.0 -2.2 +0.1 -0.2 -0.6
carbon source Ying_sugar7 rep C; time point 1 +0.1 -2.5 +0.1 -0.1 -0.5
carbon source Ying_AminoAcid20 rep C; time point 2 +0.1 -2.7 -0.0 -0.2 -0.0
stress deoxycholate 0.0125 M +0.0 -2.7 +0.1 +0.1 -0.2
nitrogen source nitrogen source nitrate 20mM +0.2 -2.2 +0.5 -1.1 -0.1
stress Hydroxylamine 0.5 M -0.0 -1.8 +0.3 -0.2 -0.9
carbon source Ying_sugar7 rep C; time point 2 -0.3 -2.1 +0.2 +0.1 -0.4
carbon source Putrescine (C) +0.1 -0.8 +0.7 -2.0 -0.3
nitrogen source nitrogen source nitrate 20mM -0.1 -1.5 +0.4 -1.1 -0.0
stress RCH2 defined with Cobalt chloride 0.02 mM -0.1 -2.0 +0.3 -0.6 +0.2
nitrogen source nitrogen source nitrite 5mM +0.1 +0.3 +0.5 -2.4 -0.3
nitrogen source L-Serine (N) +0.2 -1.5 +1.4 -1.3 -0.5
stress Magnesium chloride 0.125 M +0.2 -1.4 +0.6 -1.0 -0.1
motility inner cut, LB soft agar motility assay +0.2 -1.2 +1.4 -1.0 -0.6
vitamin No vitamins t2 +0.2 -1.2 +1.4 -1.2 -0.4
nitrogen source nitrogen source nitrite 5mM -0.0 +0.8 +0.4 -2.1 -0.2
carbon source Carnitine Hydrochloride (C) +0.1 +0.1 +1.0 -1.5 -0.4
nitrogen source L-Isoleucine (N) +0.1 -0.0 +1.1 -1.9 -0.0
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.3 +0.1 +0.8 -1.9 +0.0
carbon source D-Galactose (C) -0.3 -0.6 -1.2 +0.8 +0.5
carbon source Carnitine Hydrochloride (C) -0.0 +0.7 +0.7 -1.5 -0.2
nitrogen source L-Isoleucine (N) +0.0 +1.1 +1.2 -2.3 -0.2
carbon source D-Galactose (C) -0.3 -0.3 -0.9 +1.3 +0.2
nitrogen source Putrescine (N) +0.2 +0.3 +1.1 -1.4 -0.2
nitrogen source L-Serine (N) +0.3 +1.1 +2.0 -1.8 -0.1
motility outer cut, LB soft agar motility assay +0.2 +0.6 +1.4 -0.7 -0.0
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